MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rpsF (MPN228)
Name 
rpsF
Stable ID 
MPN228
Location 
279783 - 280430 +
Sequence 
    1  ATGCAATACA ACATTATTCT TTTAGTTGAT GGTTCGCTCT CGTTAGAGCA AGCTAACCAA
   61  GTGAATGAAA AACAACAGCA AACGTTAACC AACGTTGAGG GTTTGCAAAC AGAATACCTT
  121  GGTTTAAAGG AGTTGGCATA CCCAATTAAG AAACAACTCT CAGCGCATTA TTACCGCTGG
  181  AAGTTTAGTG GTGATAACCA ATCCACGAAG GACTTTAAGC GTACCGCTAA CATTAACAAG
  241  CAAGTATTAC GTGAACTGAT TATTAACTTA GAACGTGAGT ACGGCTACTT AGCTTCGATA
  301  AATCCAAAAA AGCAACAGCT GGCACTGCAA AAACGCGCTA AGTATGACGA AATCATTGCG
  361  CGGGAAAACA ACCCCGAAAA CCCGGATGTA CCAGTAACAT CAGGTTTAGC TTCCACCCAA
  421  CCACGCTTAT CACGTACTGA AAAGGCACAA AAACCAAAGG AAGAGCTGTG GGATGTGGTG
  481  CAAAAGATGG GAAACTTTGA CAGCGTTCAA GCCAACCCAT ACCGCCCACG TTTCAAACGC
  541  TTTAACGCGG AACACGTTAA CCAACGGCAA AACCAACAAA ACAATAACAA TAACCGTTTT
  601  GACCGCAACC GCAACCGTCA GCACAACCGC TTTAAGGATA AGCAATAA
Download Sequence
Operon 
OP95
Operon location 
279755 - 284500
Protein (mpn228)
Name 
30S ribosomal protein S6
Stable ID 
Mpn228
Molecular Weight 
23650
Isoelectric Point 
10
Localization 
SECRETOMEP
Comment Conserved operon in B. Subtilis
Sequence 
MQYNIILLVDGSLSLEQANQVNEKQQQTLTNVEGLQTEYLGLKELAYPIKKQLSAHYYRWKFSGDNQSTKDFKRTANINK
QVLRELIINLEREYGYLASINPKKQQLALQKRAKYDEIIARENNPENPDVPVTSGLASTQPRLSRTEKAQKPKEELWDVV
QKMGNFDSVQANPYRPRFKRFNAEHVNQRQNQQNNNNNRFDRNRNRQHNRFKDKQ
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation mQYNIILLVDGSLSLEQANQVNEK 1 25 M
Oxidation AQKPKEELWDVVQKmGNFDSVQANPYRPR 149 178 M
Oxidation mGNFDSVQANPYRPR 163 178 M
Oxidation mGNFDSVQANPYrPr 163 178 M
GENE/PROTEIN rpsF (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-92 TIGR00166 (IPR000529) Ribosomal protein S6 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0019843'>'rRNA' == '' ? '': 'rRNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0019843)

7.6e-27
2-89 PF01250 (IPR000529) Ribosomal protein S6 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0019843'>'rRNA' == '' ? '': 'rRNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0019843)

2.5e-16
2-92 G3DSA:3.30.70.60 (IPR014717) Translation elongation factor EF1B/ribosomal prote 1.9e-19
2-102 SSF54995 (IPR000529) Ribosomal protein S6 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0019843'>'rRNA' == '' ? '': 'rRNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0019843)

7.30001e-18
41-50 PS01048 (IPR020815) Ribosomal protein S6, conserved site Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0019843'>'rRNA' == '' ? '': 'rRNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0019843)

0
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
2 96 94 - MAG2760 Mycoplasma agalactiae 3 94 0.000000003 29.8969 126
3 95 92 - MARTH_orf696 Mycoplasma arthritidis 4 92 0.00000002 36.1702 119
38 95 57 - MHO_1120 Mycoplasma hominis 35 92 0.000002 41.3793 101
1 181 180 - MG090 Mycoplasma genitalium 1 181 <1e-50 65.1934 639
36 95 59 - MS53_0532 Mycoplasma synoviae 27 86 0.000003 36.6667 100
2 98 96 - MMOB2270 Mycoplasma mobile 4 94 0.000004 28.866 98
2 164 162 - MYCGA6150 Mycoplasma gallisepticum 3 155 2e-20 35.5828 223
2 102 100 - MYPE1140 Mycoplasma penetrans 3 104 1e-18 43.1373 209
External IDs
COG 
COG0360J
Gene ID 
876983
GI 
13507967
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR000529|Ribosomal protein S6
Old MP number 
MP603
Pathway 
Translation
PDB homologs 
1p87_F
PDB homologs 
1p6g_F
PDB homologs 
1fjg_F
Pfam 
PF01250
PID 
g1674305
RefSeq 
NP_109916.1
Swiss-Prot protein ID 
RS6_MYCPN
phylomeDB tree 
RS6_MYCPN
UniProt 
P75543
Transcription
IMAGE BROWSERS

OPERON OP95 (Genomic Overview)
Region:279755-284500

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STRING image

STRING of Mpn228STRING legend

PDB image(s)

1p87

PDB 1p87

1p6g

PDB 1p6g

1fjg

PDB 1fjg
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