DETAILED VIEW FOR Mpnr02

Rna Mpnr02
Stable ID
Mpnr02
Description
23S ribosomal RNA
Location
120057-122962 +
Sequence
CAATAAGTTACTAAGGGCTTATGGTGGATGCCTTGGCACTAATAGGCGATGAAGGACGTGTTAACCTGCGATAAGCTTCG
GGTAGGTGGTAAGAACCTCAGATCCGGAGATTTCCGAATGGAGCAATCCGGTAGTTGGAAACAGCTATCATTAATTGATG
AATAAATAGTCAATTAAAGCAATACGTGGTGAAGTGAAACATCTCAGTAGCCACAGGAAAAGAAAACGAATGTGATTCCG
TGTGTAGTGGCGAGCGAAAGCGGAACAGGCCAAACTTATCATTAGATAGGGGTTGTAGGGCTTGCAATGTGGACTTGAAA
ACGATAGAAGAAGCTGTTGGAAAGCAGCGCGCAAAAGGGTGATAGCCCCGTATTTGAAATTGTTTTCATACCTAGCGAGA
TCCCTGAGTAGCTCGGAAAACGTTATTTTGAGTGAATCTGCCCAGACCATTGGGTAAGCCTAAATACTAATTAGTGACCG
ATAGCGAAACAGTACCGTGAGGGAAAGGTGAAAAGAACCCAGAGATGGGAGTGAAATAGATTCTGAAACCATATGCCTAC
AACGTGTCAGAGCACATTAATGTGTGATGGCGTGCGTTTTGAAGTATGAGCCGGCGAGTTATGATAGCAAGCGTTAGTTA
ACCAGGAGATGGGGAGCTGTAGCGAAAGCGAGTTTTAAAAGAGCGTTTGTTTGTTATTATAGACCCGAAACGGGTTGAGC
TAGTCATGAGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCGACTCTCGTTGAAACGATAGCGGATGACTT
GTGATTAGGGGTGAAATTCCAATCGAAATCCGTGATAGCTGGTTCTCGTCGAAATAGCTTTAAGGCTAGCGTGAGATCAC
AAATAAGTGGAGGTAAAGCTACTGAATGTATGATGGCGCCACCTAGGCGTACTGAATACAATTAAACTCTGAATGCCATT
TATTTTATTCTCGCAGTCAGACAGTGGGGGATAAGCTTCATTGTCAAGAGGGGAAGAGCCCAGATCATTAAATAAGGTCC
CCAAAATATACTAAGTGGAAAAGGATGTGAAAGTGCTAAAACAGCAAGGATGTTGGCTTAGAAGCAGCCATCGTTTAAAG
AGTGCGTAACAGCTCACTTGTCGAGTGTTTTTGCGCCGAAGATGTAACGGGGCTAAGTATATTACCGAATTTATGGATAA
GATTTATATCTTGTGGTAGACGAGCGTTGTATTGGAGTTGAAGTCAAAGCGTGAGCATTGGTGGATCCAATACAAGTGAG
AATGCCGGCATGAGTAACGCTTGGGAGTGAGAATCTCCCAAACCGATTGACTAAGGTTTCCTGGACCAGGGTCGTCCTTC
CAGGGTTAGTCTGGACCTAAGCTGAGGCTGAAAAGCGTAGGCGATGGACAACAGGTTAATATTCCTGTACTTACAGTTAG
ACTGATGGAGTGACAAAGAAGGTTTTCCACCCCCATAATTGGATTTGGGGATAAATCATAAGGTGGTACAATAGGCAAAT
CCGTTGTGCATAACATTGAGTGATGATGTCGAGTGAATGAGTGATCAAGTAGCGAAGGTGGTATTAATCATGCTTTCAAG
AAAAGCTTCTAGGGTTAATCTAGCTGTAACCAGTACCGAGAACGAACACACGTAGTCAAGGAGAGGATCCTAAGGTTAGC
GAGTGAACTATAGCCAAGGAACTCTGCAAATTAACCCCGTAAGTTAGCGAGAAGGGGTGCTTATGTAAAAGTAAGCCGCA
GTGAAGAACGAGGGGGGACTGTTTAACTAAAACACAACTCTATGCCAAACCGTAAGGTGATGTATATGGGGTGACACCTG
CCCAGTGCTGGAAGGTTAAAGAAGGAGGTTAGCGCAAGCGAAGCTTTTAACTGAAGCCCCAGTGAACGGCGGCCGTAACT
ATAACGGTCCTAAGGTAGCGAAATTCCTAGTCGGGTAAATTCCGTCCCGCTTGAATGGTGTAACCATCTCTTGACTGTCT
CGGCTATAGACTCGGTGAAATCCAGGTACGGGTGAAGACACCCGTTAGGCGCAACGGGACGGAAAGACCCCGTGAAGCTT
TACTGTAGCTTAATATTGATCAGGACATTATCATGTAGAGAATAGGTAGGAGCAATCGATGCAAGTTCGCTAGGACTTGT
TGATGCGAAAGGTGGAATACTACCCTTGGTTGTGTGCTGTTCTAATTGGTAACTGTTATCCAGTTTCAAGACAGTGTTAG
GTGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGTACAAAGGTACCTTCAGTACGGTTGGAAATCG
TATGTAGAGTGTAATGGTGTAAGGGTGCTTGACTGTGAGACATACAGGTCGAACAGGTGAGAAATCAGGTCATAGTGATC
CGGTGGTCCAGTATGGAATGGCCATCGCTCAACGGATAAAAGCTACTCCGGGGATAACAGGCTGATACTGCCCAAGAGTT
CATATCGACGGCAGTGTTTGGCACCTCGATGTCGACTCATCTCATCCTCGAGCTGAAGCAGGTTCGAAGGGTTCGGCTGT
TCGCCGATTAAAGAGATACGTGAGTTGGGTTCAAACCGTCGTGAGACAGGTTGGTCCCTATCTATTGTGCCCGTAGGAAG
ATTGAAGAGTGTTGCTTCTAGTACGAGAGGACCGAAGCGAGGACACCTCTTATGCTCCAGTTGTAGCGCCAGCTGCACCG
CTGGGTAGTAACGTGTCTATTAGATAAACGCTGAAAGCATCTAAGTGTGAAACTATCTCAAAGATTAATCTTCCCATTTC
GCAAGAAAGTAAGAGCCGTCAAAGACGATGACGTTGATAGGTTACAGGTGTAAGCATAGTGATATGTTGAGCTGAGTAAT
ACTAATTGCTCGAGGACTTATTGGAA
Operon
OP40
Operon location
118248 - 123130
ORFs (EMBOSS)
ORF description Blast Hit (vs UniRef100)
Sequence Location (nt) Translation QStart QEnd QSize Target TStart TEnd Evalue Identity
GTGGTAAGAACCTCAGATCC
GGAGATTTCCGAATGGAGCA
ATCCGGTAGTTGGAAACAGC
TATCAT
120142-120207 +
MVRTSDPEISEWSNPVVGNS
YH
no hit
ATGAAGGACGTGTTAACCTG
CGATAAGCTTCGGGTAGGTG
GTAAGAACCTCAGATCCGGA
GATTTCCGAATGGAGCAATC
CGGTAGTTGGAAACAGCTAT
CATTAATTGATGAA
120105-120218 +
MKDVLTCDKLRVGGKNLRSG
DFRMEQSGSWKQLSLIDE
no hit
ATTAAAGCAATACGTGGTGA
AGTGAAACATCTCAGTAGCC
ACAGGAAAAGAAAACGAATG
TGATTCCGTGTG
120229-120300 +
MKAIRGEVKHLSSHRKRKRM
WFRV
no hit
TTGGAAACAGCTATCATTAA
TTGATGAATAAATAGTCAAT
TAAAGCAATACGTGGTGAAG
TGAAACATCTCAGTAGCCAC
AGGAAAAGAAAACGAATGTG
ATTCCGTGTGTAGTGGCGAG
CGAAAGCGGAACAGGCCAAA
CTTATCATTAGATAGGGGTT
GTAGGGCTTGCAATGTGGAC
TTGAAAACGATAGAAGAAGC
TGTTGGAAAGCAGCGCGCAA
AAGGGTGA
120191-120418 +
METAIINWWINSQLKQYVVK
WNISVATGKENECDSVCSGE
RKRNRPNLSLDRGCRACNVD
LKTIEEAVGKQRAKGW
no hit
CTGTTGGAAAGCAGCGCGCA
AAAGGGTGATAGCCCCGTAT
TTGAAATTGTTTTCATACCT
AGCGAGATCCCTGAG
120390-120464 +
MLESSAQKGDSPVFEIVFIP
SEIPE
no hit
TTGCAATGTGGACTTGAAAA
CGATAGAAGAAGCTGTTGGA
AAGCAGCGCGCAAAAGGGTG
ATAGCCCCGTATTTGAAATT
GTTTTCATACCTAGCGAGAT
CCCTGAGTAGCTCGGAAAAC
GTTATTTTGAGTGAATCTGC
CCAGACCATTGGG
120358-120510 +
MQCGLENDRRSCWKAARKRV
IAPYLKLFSYLARSLSSSEN
VILSESAQTIG
no hit
TTAGTGACCGATAGCGAAAC
AGTACCGTGAGGGAAAGGTG
AAAAGAACCCAGAGATGGGA
GTGAAA
120527-120592 +
MVTDSETVPWGKGEKNPEMG
VK
no hit
GTGAGGGAAAGGTGAAAAGA
ACCCAGAGATGGGAGTGAAA
TAGATTCTGAAACCATATGC
CTACAACGTGTCAGAGCACA
T
120553-120633 +
MRERWKEPRDGSEIDSETIC
LQRVRAH
no hit
ATAGCGAAACAGTACCGTGA
GGGAAAGGTGAAAAGAACCC
AGAGATGGGAGTGAAATAGA
TTCTGAAACCATATGCCTAC
AACGTGTCAGAGCACATTAA
TGTGTGATGGCGTGCGTTTT
GAAGTATGAGCCGGCGAGTT
ATGA
120537-120680 +
MAKQYREGKVKRTQRWEWNR
FWNHMPTTCQSTLMCDGVRF
EVWAGELW
no hit
ATTCTGAAACCATATGCCTA
CAACGTGTCAGAGCACATTA
ATGTGTGATGGCGTGCGTTT
TGAAGTATGAGCCGGCGAGT
TATGATAGCAAGCGTTAGT
120596-120694 +
MLKPYAYNVSEHINVWWRAF
WSMSRRVMIASVS
no hit
TTAAAAGAGCGTTTGTTTGT
TATTATAGACCCGAAACGGG
TTGAGCTAGTCATGAGCAGG
TTGAAGGTTGAG
120731-120802 +
MKERLFVIIDPKRVELVMSR
LKVE
no hit
TTAACCAGGAGATGGGGAGC
TGTAGCGAAAGCGAGTTTTA
AAAGAGCGTTTGTTTGTTAT
TATAGACCCGAAACGGGTTG
AGCTAGTCATGAGCAGGTTG
AAGGTTGAGTAACATCAACT
GGAGGACCGAACCGACTCTC
GTTGAAACGA
120694-120843 +
MTRRWGAVAKASFKRAFVCY
YRPETGWASHEQVEGWVTST
GGPNRLSLKR
no hit
CTGGAGGACCGAACCGACTC
TCGTTGAAACGATAGCGGAT
GACTTGTGATTAGGGGTGAA
ATTCCAATCGAAATCCGTGA
TAGCTGGTTCTCGTCGAAA
120812-120910 +
MEDRTDSRWNDSGWLVIRGE
IPIEIRDSWFSSK
no hit
TTGAGTAACATCAACTGGAG
GACCGAACCGACTCTCGTTG
AAACGATAGCGGATGACTTG
TGATTAGGGGTGAAATTCCA
ATCGAAATCCGTGATAGCTG
GTTCTCGTCGAAATAGCTTT
AAGGCTAGCGTGAGATCACA
AATAAGTGGAGGTAAAGCTA
CTGAATGTATGATGGCGCCA
CCTAGGCGTACTGAATACAA
T
120798-120998 +
MSNINWRTEPTLVETIADDL
WLGVKFQSKSVIAGSRRNSF
KASVRSQISGGKATECMMAP
PRRTEYN
no hit
GTGGAGGTAAAGCTACTGAA
TGTATGATGGCGCCACCTAG
GCGTACTGAATACAATTAAA
CTCTGAATGCCATTTATTTT
ATTCTCGCAGTCAGACAGTG
GGGGA
120943-121047 +
MEVKLLNVWWRHLGVLNTIK
LWMPFILFSQSDSGG
no hit
ATACAATTAAACTCTGAATG
CCATTTATTTTATTCTCGCA
GTCAGACAGTGGGGGATAAG
CTTCATTGTCAAGAGGGGAA
GAGCCCAGATCAT
120992-121084 +
MQLNSECHLFYSRSQTVGDK
LHCQEGKSPDH
no hit
CTGAATGCCATTTATTTTAT
TCTCGCAGTCAGACAGTGGG
GGATAAGCTTCATTGTCAAG
AGGGGAAGAGCCCAGATCAT
TAAA
121005-121088 +
MNAIYFILAVRQWGISFIVK
RGRAQIIK
no hit
GTGGAAAAGGATGTGAAAGT
GCTAAAACAGCAAGGATGTT
GGCTTAGAAGCAGCCATCGT
TTAAAGAGTGCG
121111-121182 +
MEKDVKVLKQQGCWLRSSHR
LKSA
no hit
GTGTTTTTGCGCCGAAGATG
TAACGGGGCTAAGTATATTA
CCGAATTTATGGATAAGATT
TATATCTTGTGG
121201-121272 +
MFLRRRCNGAKYITEFMDKI
YILW
no hit
TTGGAGTTGAAGTCAAAGCG
TGAGCATTGGTGGATCCAAT
ACAAGTGAGAATGCCGGCAT
GAG
121288-121350 +
MELKSKREHWWIQYKWECRH
E
no hit
GTGCGTAACAGCTCACTTGT
CGAGTGTTTTTGCGCCGAAG
ATGTAACGGGGCTAAGTATA
TTACCGAATTTATGGATAAG
ATTTATATCTTGTGGTAGAC
GAGCGTTGTATTGGAGTTGA
AGTCAAAGCGTGAGCATTGG
TGGATCCAATACAAGTGAGA
ATGCCGGCATGAGTAACGCT
TGGGAGTGAGAATCTCCCAA
ACCGATTGAC
121178-121387 +
MRNSSLVECFCAEDVTGLSI
LPNLWIRFISCGRRALYWSW
SQSVSIGGSNTSENAGMSNA
WEWESPKPID
no hit
TTGGGAGTGAGAATCTCCCA
AACCGATTGACTAAGGTTTC
CTGGACCAGGGTCGTCCTTC
CAGGGT
121357-121422 +
MGVRISQTDWLRFPGPGSSF
QG
no hit
TTATATCTTGTGGTAGACGA
GCGTTGTATTGGAGTTGAAG
TCAAAGCGTGAGCATTGGTG
GATCCAATACAAGTGAGAAT
GCCGGCATGAGTAACGCTTG
GGAGTGAGAATCTCCCAAAC
CGATTGACTAAGGTTTCCTG
GACCAGGGTCGTCCTTCCAG
GGTTAGTCTGGACC
121260-121433 +
MYLVVDERCIGVEVKAWALV
DPIQVRMPAWVTLGSENLPN
RLTKVSWTRVVLPGLVWT
no hit
ATGGACAACAGGTTAATATT
CCTGTACTTACAGTTAGACT
GATGGAGTGACAAAGAAGGT
TTTCCACCCCCA
121460-121531 +
MDNRLIFLYLQLDWWSDKEG
FPPP
no hit
CTGAGGCTGAAAAGCGTAGG
CGATGGACAACAGGTTAATA
TTCCTGTACTTACAGTTAGA
CTGATGGAGTGACAAAGAAG
GTTTTCCACCCCCATAATTG
GATTTGGGGATAAATCA
121438-121554 +
MRLKSVGDGQQVNIPVLTVR
LMEWQRRFSTPIIGFGDKS
no hit
ATAGGCAAATCCGTTGTGCA
TAACATTGAGTGATGATGTC
GAGTGAATGAGTGATCAAGT
AGCGAAGGTGGTATTAATCA
TGCTTTCAAGAAAAGCTTC
121567-121665 +
MGKSVVHNIEWWCRVNEWSS
SEGGINHAFKKSF
no hit
TTGTGCATAACATTGAGTGA
TGATGTCGAGTGAATGAGTG
ATCAAGTAGCGAAGGTGGTA
TTAATCATGCTTTCAAGAAA
AGCTTCTAGGGTTAATCTAG
CTGTAACCAGTACCGAGAAC
GAACACACG
121580-121708 +
MCITLSDDVEWMSDQVAKVV
LIMLSRKASRVNLAVTSTEN
EHT
no hit
TTAGCGAGAAGGGGTGCTTA
TGTAAAAGTAAGCCGCAGTG
AAGAACGAGGGGGGACTGTT

121780-121839 +
MARRGAYVKVSRSEERGGTV

no hit
TTATGTAAAAGTAAGCCGCA
GTGAAGAACGAGGGGGGACT
GTTTAACTAAAACACAACTC
TATGCCAAACCG
121797-121868 +
MCKSKPQWRTRGDCLTKTQL
YAKP
no hit
ATGCCAAACCGTAAGGTGAT
GTATATGGGGTGACACCTGC
CCAGTGCTGGAAGGTTAAAG
AAGGAGGTTAGCGCAAGCGA
AGCTTTTAACTGAAGCCCCA
GTGAACGGCGGCCG
121858-121971 +
MPNRKVMYMGWHLPSAGRLK
KEVSASEAFNWSPSERRP
no hit
TTAGCGCAAGCGAAGCTTTT
AACTGAAGCCCCAGTGAACG
GCGGCCGTAACTATAACGGT
CCTAAGGTAGCGAAATTCCT
AGTCGGG
121925-122011 +
MAQAKLLTEAPVNGGRNYNG
PKVAKFLVG
no hit
ATCCAGGTACGGGTGAAGAC
ACCCGTTAGGCGCAACGGGA
CGGAAAGACCCCGTGAAGCT
TTACTG
122076-122141 +
MQVRVKTPVRRNGTERPREA
LL
no hit
ATTCCTAGTCGGGTAAATTC
CGTCCCGCTTGAATGGTGTA
ACCATCTCTTGACTGTCTCG
GCTATAGACTCGGTGAAATC
CAGGTACGGGTGAAGACACC
CGTTAGGCGCAACGGGACGG
AAAGACCCCGTGAAGCTTTA
CTGTAGCTTAATATTGATCA
GGACATTATCATGTAGAGAA

121999-122178 +
MPSRVNSVPLEWCNHLLTVS
AIDSVKSRYGWRHPLGATGR
KDPVKLYCSLILIRTLSCRE

no hit
ATAGGTAGGAGCAATCGATG
CAAGTTCGCTAGGACTTGTT
GATGCGAAAGGTGGAATACT
ACCCTTGGTTGTGTGCTGTT
C
122178-122258 +
MGRSNRCKFARTCWCERWNT
TLGCVLF
no hit
ATCGATGCAAGTTCGCTAGG
ACTTGTTGATGCGAAAGGTG
GAATACTACCCTTGGTTGTG
TGCTGTTCTAATTGG
122191-122265 +
MDASSLGLVDAKGGILPLVV
CCSNW
no hit
TTGTTGATGCGAAAGGTGGA
ATACTACCCTTGGTTGTGTG
CTGTTCTAATTGGTAACTGT
TATCCAGTTTCAAGACAGTG
T
122213-122293 +
MLMRKVEYYPWLCAVLIGNC
YPVSRQC
no hit
TTGGTAACTGTTATCCAGTT
TCAAGACAGTGTTAGGTGGG
CAGTTTGACTGGGGCGGTCG
CCTCCTAAAAGG
122262-122333 +
MVTVIQFQDSVRWAVWLGRS
PPKR
no hit
CTGTTATCCAGTTTCAAGAC
AGTGTTAGGTGGGCAGTTTG
ACTGGGGCGGTCGCCTCCTA
AAAGGTAACGGAGGCGTACA
AAGGTACCTTCAGTACGGTT
GGAAATCGTATGTAGAGTGT
AATGGTGTAAGGGTGCTTGA
CTGTGAGACATACAGGTCGA
ACAGGTGAGAAATCAGGTCA

122269-122448 +
MLSSFKTVLGGQFDWGGRLL
KGNGGVQRYLQYGWKSYVEC
NGVRVLDCETYRSNRWEIRS

no hit
CTGTGAGACATACAGGTCGA
ACAGGTGAGAAATCAGGTCA
TAGTGATCCGGTGGTCCAGT
ATGGAATGGCCATCGCTCAA
CGGA
122409-122492 +
MWDIQVEQVRNQVIVIRWSS
MEWPSLNG
no hit
ATATCGACGGCAGTGTTTGG
CACCTCGATGTCGACTCATC
TCATCCTCGAGCTGAAGCAG
GTTCGAAGGGTTCGGCTGTT
CGCCGAT
122538-122624 +
MSTAVFGTSMSTHLILELKQ
VRRVRLFAD
no hit
TTGACTGTGAGACATACAGG
TCGAACAGGTGAGAAATCAG
GTCATAGTGATCCGGTGGTC
CAGTATGGAATGGCCATCGC
TCAACGGATAAAAGCTACTC
CGGGGATAACAGGCTGATAC
TGCCCAAGAGTTCATATCGA
CGGCAGTGTTTGGCACCTCG
ATGTCGACTCATCTCATCCT
CGAGCTGAAGCAGGTTCGAA
GGGTTCGGCTGTTCGCCGAT
TAAAGAGATACGTGAGTTGG
GTTCAAACCGTCGTGAGACA
GGTTGGTCCCTATCTATTGT
GCCCG
122405-122689 +
MTVRHTGRTGEKSGHSDPVV
QYGMAIAQRIKATPGITGWY
CPRVHIDGSVWHLDVDSSHP
RAEAGSKGSAVRRLKRYVSW
VQTVVRQVGPYLLCP
no hit
CTGATACTGCCCAAGAGTTC
ATATCGACGGCAGTGTTTGG
CACCTCGATGTCGACTCATC
TCATCCTCGAGCTGAAGCAG
GTTCGAAGGGTTCGGCTGTT
CGCCGATTAAAGAGATACGT
GAGTTGGGTTCAAACCGTCG
TGAGACAGGTTGGTCCCTAT
CTATTGTGCCCGTAGGAAGA
TTGAAGAGTGTTGCTTCTAG
TACGAGAGGACCGAAGCGAG
GACACCTCTTATGCTCCAGT
TGTAGCGCCAGCTGCACCGC
TGGG
122518-122781 +
MILPKSSYRRQCLAPRCRLI
SSSSWSRFEGFGCSPIKEIR
ELGSNRRETGWSLSIVPVGR
LKSVASSTRGPKRGHLLCSS
CSASCTAG
no hit
GTGTTGCTTCTAGTACGAGA
GGACCGAAGCGAGGACACCT
CTTATGCTCCAGTTGTAGCG
CCAGCTGCACCGCTGGGTAG
TAACGTGTCTATTAGA
122705-122800 +
MLLLVREDRSEDTSYAPVVA
PAAPLGSNVSIR
no hit
CTGAAAGCATCTAAGTGTGA
AACTATCTCAAAGATTAATC
TTCCCATTTCGCAAGAAAGT
AAGAGCCGTCAAAGACGATG
ACGTTGA
122807-122893 +
MKASKCETISKINLPISQES
KSRQRRWRW
no hit
CTGCACCGCTGGGTAGTAAC
GTGTCTATTAGATAAACGCT
GAAAGCATCTAAGTGTGAAA
CTATCTCAAAGATTAATCTT
CCCATTTCGCAAGAAAGTAA
GAGCCGTCAAAGACGATGAC
GTTGATAGGTTACAGGTG
122769-122906 +
MHRWVVTCLLDKRWKHLSVK
LSQRLIFPFRKKVRAVKDDD
VDRLQV
no hit
ATGACGTTGATAGGTTACAG
GTGTAAGCATAGTGATATGT
TGAGCTGAGTAATACTAATT
GCTCGAGGACTTATTGGA
122884-122961 +
MTLIGYRCKHSDMLSWVILI
ARGLIG
no hit
IMAGE BROWSERS

OPERON OP40 (Genomic Overview)
Region:118248-123130

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