MyMpn Project

Gene rpmB (MPN624)

Name	rpmB
Stable ID	MPN624
Location	751224 - 751421 +
Sequence	1 ATGGCAAAAA AAGACCAACT TACTTTAAGA GGGCCTTTGT ATGGCAACAA TCGTTCCCAC 61 TCCAAGACTA TTACGCGCAG AAAGTGGAAT GTTAACCTCC AACCATGCAA GGTCAAAACT 121 GCTGATGGCA AGACCACCAG AATCTTAGTT TCTACCAGAA CACTGCGCAC CTTAAAGAAA 181 CACAACCGCC TCTCTTAG
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Operon	OP248
Operon location	749790 - 751400

Protein (mpn624)

Name	50S ribosomal protein L28
Stable ID	Mpn624
Molecular Weight	7150
Isoelectric Point	12
Localization	SECRETOMEP
Comment	-
Sequence	MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKKHNRLS

Post translational modifications

No post translational modifications were found

GENE/PROTEIN rpmB (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
1-57	TIGR00009 (IPR001383)	Ribosomal protein L28	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412) Cellular Component: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)		4.2e-21
1-60	G3DSA:2.30.170.40 (n.a.)	NULL			3.2e-18
1-64	SSF143800 (n.a.)	NULL			9.70002e-17
3-61	PF00830 (IPR001383)	Ribosomal protein L28	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412) Cellular Component: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)		0.000000000000016

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	60	59	- MARTH_orf005	Mycoplasma arthritidis	1	60	0.000001	40	98
1	65	64	- MAG0970	Mycoplasma agalactiae	1	65	0.0000000000003	49.2308	155
1	64	63	- MCJ_006970	Mycoplasma conjunctivae	1	64	0.0000000000003	45.3125	155
1	64	63	- MCAP_0488	Mycoplasma capricolum subsp. capricolum	1	64	0.0000000000007	48.4375	152
1	65	64	- MYCGA5300	Mycoplasma gallisepticum	1	64	0.000000000000009	56.9231	168
1	64	63	- MG426	Mycoplasma genitalium	1	64	4e-28	84.375	281
1	60	59	- MHP7448_0122	Mycoplasma hyopneumoniae 7448	1	60	0.000000000000008	56.6667	169
1	65	64	- MHO_0070	Mycoplasma hominis	1	65	0.0000003	36.9231	102
1	61	60	- MMOB4150	Mycoplasma mobile	1	61	0.000000000006	47.541	143
1	64	63	- MSC_0483	Mycoplasma mycoides subsp. mycoides SC	1	64	0.0000000000007	48.4375	153
1	64	63	- MYPE4030	Mycoplasma penetrans	1	64	0.0000000003	40.625	130
1	60	59	- LIC_11760	Leptospira interrogans serovar Copenhage	1	61	0.0000007	45.9016	105
1	60	59	- MS53_0066	Mycoplasma synoviae	1	59	0.000000002	45	121
1	62	61	-	Mycoplasma pulmonis	1	61	0.00000000001	43.5484	142

External IDs

COG	COG0227J
Gene ID	877270
GI	13508363
GO	Translation, ribosomal structure and biogenesis
Home COG	J
InterPro	IPR001383\|Ribosomal protein L28
Old MP number	MP218
Pathway	Translation
Pfam	PF00830
PID	g1673884
RefSeq	NP_110313.1
Swiss-Prot protein ID	RL28_MYCPN
phylomeDB tree	RL28_MYCPN
UniProt	P75171

Transcription

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OPERON OP248 (Genomic Overview)

Region:749790-751400

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