MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene nifS (MPN487)
Name 
nifS
Stable ID 
MPN487
Location 
590569 - 591795 +
Sequence 
    1  ATGACCAAAA CTAAGTTTAA TCCGTACCAA TTTCGCAAAC AATTTAAGTG GTTTAAAAAC
   61  AACCCCCAAT GGGTTAACTT TGACAACGCT GCTACCTCAA TTGCGCTAGA CACCGTTAGT
  121  CAAGCTTGCA AGGAATACTA TGAGCTTTTT AGTGTCAACC CCCACAATAA AACCCCTGAT
  181  CTCAACAACC AGATTATTGC CATTATTGCT GAAACCCGTC AACTAGTAGC GGACTGGTTT
  241  AATGTCACTG CACTTGAAAT TATCTTTACA AGTTCAGCCA CGGAGTCCAT TAATTTGTTT
  301  GCCCATGGCT TAAAGCCCTG GATTAAACCC GGTGATGAAA TTGTCTTAAA GGGTGATGAA
  361  CACTCGGCTA ACGTTTTGCC CTGAGTTGCA CTAGCTAAAC AAACAAAGGC CAGACTAGTA
  421  TGGGTCGAAA AGCAAGCTAA CCAATCCTTA GAAGACACTT TTAAGTCATT GATTAACCCG
  481  AAAACTAAAG TAGTAGCCAT TACCGCTACT TCCAATTTGT TTGGCAATTC AATTGACTTT
  541  GCTCAAATTG CCGATTACCT CAAACAAGTC AATCCTAAAG CTTTTGTAGC CGTGGATGCA
  601  GTGCAAACGG TGCAGCACAA GCAAATTGAC ATTGCCAAAA CCCAGATCGA CTTCCTAGCC
  661  TTTTCTACTC ATAAGTTTTA CGGTCCCACT GGACTGGGGG TAGCTTACAT TAAAAAAAGC
  721  TTACAACCCC AATTACAACC CCTCAAACTC GGGGGTGATA TCTTTACCCA GATTGACCCG
  781  GACAATACAA TTCACTTTAA AAGTACACCC CTAAAGTTTG AAGCCGGTAC CCCCAACATT
  841  ATGGCCATCT ATGCCTTAAA CAAGCTGTTG CGCTTCTTTA AACAAAAGTT TAATTTTGCC
  901  CAAATGATGG CTTATGGTCA CCAACTTAAA CAACAAGCTT ACGAACTGTT AAACAGTAAT
  961  CCGCAAATTG TGCTGGCCAA CCACGACCAG GATGTCCCGA TTTTTTCCTT TAAACACCGC
 1021  CAATTGGCTA CCATTGATCT AGCCACTTTC CTAAACATCA ATAAGATCAT GGTACGCCAG
 1081  GGCTCCATTT GTGTGGGACG TTACCGCAAT AAGGATTACT TTGTGAGAGT TTCGTTAATG
 1141  CACTATAACA CAGTGAAGGA GTTGCAGTAT TTAGCTAAAC TCCTAGCAAC TGATACCAAG
 1201  ACAATTATTA AAAACGTAAT TAAGTAA
Download Sequence
Operon 
OP209
Operon location 
590500 - 592200
Protein (mpn487)
Name 
Probable cysteine desulfurase (EC 2.8.1.7)
Stable ID 
Mpn487
Molecular Weight 
44880
Isoelectric Point 
10
Localization 
Cytoplasm
Comment L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine
Sequence 
MTKTKFNPYQFRKQFKWFKNNPQWVNFDNAATSIALDTVSQACKEYYELFSVNPHNKTPDLNNQIIAIIAETRQLVADWF
NVTALEIIFTSSATESINLFAHGLKPWIKPGDEIVLKGDEHSANVLPWVALAKQTKARLVWVEKQANQSLEDTFKSLINP
KTKVVAITATSNLFGNSIDFAQIADYLKQVNPKAFVAVDAVQTVQHKQIDIAKTQIDFLAFSTHKFYGPTGLGVAYIKKS
LQPQLQPLKLGGDIFTQIDPDNTIHFKSTPLKFEAGTPNIMAIYALNKLLRFFKQKFNFAQMMAYGHQLKQQAYELLNSN
PQIVLANHDQDVPIFSFKHRQLATIDLATFLNINKIMVRQGSICVGRYRNKDYFVRVSLMHYNTVKELQYLAKLLATDTK
TIIKNVIK
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation QLATIDLATFLNINKImVR 341 360 M
Oxidation VSLmHYNTVK 377 387 M
GENE/PROTEIN nifS (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
6-395 SSF53383 (IPR015424) Pyridoxal phosphate-dependent transferase, major d 0
23-402 PTHR11601 (n.a.) NULL 0
25-391 PF00266 (IPR000192) Aminotransferase, class V/Cysteine desulfurase Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

0
38-284 G3DSA:3.40.640.10 (IPR015421) Pyridoxal phosphate-dependent transferase, major r Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003824'>'catalytic' == '' ? '': 'catalytic'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003824) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0030170'>'pyridoxal' == '' ? '': 'pyridoxal'; 'phosphate' == '' ? '': 'phosphate'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0030170)

0
216-235 PS00595 (IPR020578) Aminotransferase class-V pyridoxal-phosphate bindi 0
285-396 G3DSA:3.90.1150.10 (IPR015422) Pyridoxal phosphate-dependent transferase, major r Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003824'>'catalytic' == '' ? '': 'catalytic'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003824) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0030170'>'pyridoxal' == '' ? '': 'pyridoxal'; 'phosphate' == '' ? '': 'phosphate'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0030170)

0.000025
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
34 395 361 - MAG0720 Mycoplasma agalactiae 16 377 5.99756e-43 32.3607 420
60 237 177 - Bacillus subtilis subsp. subtilis 36 212 0.0000003 26.2295 119
11 395 384 - MARTH_orf184 Mycoplasma arthritidis 3 378 6e-30 28.7179 308
8 396 388 - Caulobacter crescentus NA1000 6 401 1e-38 29.25 389
27 395 368 - MCJ_002850 Mycoplasma conjunctivae 16 371 1.96182e-44 32.7078 433
11 395 384 - MHO_1230 Mycoplasma hominis 3 378 8e-36 27.7635 357
20 395 375 - Lactococcus lactis subsp. lactis KF147 17 395 6e-33 29.765 337
27 292 265 - Lactococcus lactis subsp. lactis KF147 4 251 0.0000000000002 26.7658 169
27 234 207 - Lactococcus lactis subsp. lactis KF147 4 211 0.000000000009 26.8868 154
6 406 400 - Bacillus subtilis subsp. subtilis 1 405 4e-38 29.4686 386
70 233 163 - Bacillus subtilis subsp. subtilis 23 194 0.0000007 28.4916 116
69 236 167 - Bacillus subtilis subsp. subtilis 47 213 0.000000006 29.4118 134
69 236 167 - Bacillus subtilis subsp. subtilis 47 213 0.000000005 29.4118 135
60 237 177 - Bacillus subtilis subsp. subtilis 41 217 0.0000003 26.2295 120
6 406 400 - Bacillus subtilis subsp. subtilis 1 405 4e-38 29.4686 386
70 233 163 - Bacillus subtilis subsp. subtilis 39 210 0.000001 27.933 115
69 233 164 - MT3109 Mycobacterium tuberculosis 44 213 0.00000002 26.8571 128
53 252 199 - b2530 Escherichia coli 35 233 0.00000000000001 27.7228 181
11 391 380 - Rv1464 Mycobacterium tuberculosis 13 403 3e-29 26.75 307
24 397 373 - MT3887 Mycobacterium tuberculosis 19 396 0.00000000000007 21.393 175
27 391 364 - b1680 Escherichia coli 27 394 1e-38 28.6096 388
10 391 381 - MCAP_0469 Mycoplasma capricolum subsp. capricolum 7 397 <1e-50 32.9146 496
6 391 385 - b2810 Escherichia coli 4 388 5.00264e-43 29.8469 426
1 407 406 - MG336 Mycoplasma genitalium 1 407 <1e-50 60.1966 1276
27 391 364 - MS53_0322 Mycoplasma synoviae 18 373 3e-35 27.6423 353
18 395 377 - MHP7448_0164 Mycoplasma hyopneumoniae 7448 4 372 7e-37 29.7927 367
10 391 381 - MMOB0790 Mycoplasma mobile 4 376 9.99995e-41 30.3896 399
10 391 381 - MSC_0501 Mycoplasma mycoides subsp. mycoides SC 7 397 <1e-50 31.8878 496
1 408 407 - LIC_10634 Leptospira interrogans serovar Copenhage 1 415 2e-36 28.91 369
24 226 202 - LIC_20204 Leptospira interrogans serovar Copenhage 22 215 0.0000000004 26.4423 142
12 407 395 - MYCGA2790 Mycoplasma gallisepticum 7 398 <1e-50 39.25 707
10 393 383 - MYPE7430 Mycoplasma penetrans 4 393 <1e-50 32.3155 492
10 395 385 - Mycoplasma pulmonis 6 377 5e-37 29.4118 369
10 388 378 - Mycoplasma pulmonis 17 381 2e-29 27.0833 304
External IDs
COG 
COG0520E
EC number 
2.8.1.7
Gene ID 
877233
GI 
13508226
GO 
Post-translational modification, protein turnover, chaperones
Home COG 
O
InterPro 
IPR000192|Aminotransferase, class V
Old MP number 
MP355
Pathway 
Metabolism  tRNA
PDB homologs 
1kmj_A
PDB homologs 
1DGD
PDB homologs 
1i29_A
PDB homologs 
1jf9_A
Pfam 
PF00266
PID 
g1674033
RefSeq 
NP_110175.1
Swiss-Prot protein ID 
CSD_MYCPN
phylomeDB tree 
CSD_MYCPN
UniProt 
P75298
Transcription
IMAGE BROWSERS

OPERON OP209 (Genomic Overview)
Region:590500-592200

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STRING image

STRING of Mpn487STRING legend

PDB image(s)

1kmj

PDB 1kmj

1DGD

PDB 1DGD

1i29

PDB 1i29

1jf9

PDB 1jf9
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