MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene dnaG (MPN353)
Name 
dnaG
Stable ID 
MPN353
Location 
420293 - 422155 -
Sequence 
    1  ATGACCAGTC CCACTAGCCT AGATCAGCTC AAACAGCAAA TCAAAATAGC TCCCATAGTG
   61  GAGCACTATG CCATTAAGCT AAAAAAGAAG GGGAAGGACT TTGTGGCACT CTGTCCCTTT
  121  CATGCTGACC AAAACCCCTC GATGACGGTG TCAGTTGCAA AGAACATCTT TAAGTGTTTC
  181  TCGTGTCAGG TGGGCGGTGA TGGGATTGCT TTTATCCAAA AAATTGATCA GGTAGATTGA
  241  AAAACGGCGC TCAATAAGGC ACTTAGTATT CTCAATCTTG ACTCACAATA CGCTGTTAAC
  301  TTTTACCTTA AGGAAGTTGA CCCAAAGTTA AAGCGCTATT GGGATCTACA CAGTGCCCTA
  361  GTCGATTACT ATCAAACCCG GTTAAAGCTA GAGCCCAAAG AGCAGGGTTT GACTTACTTA
  421  ACTGAAACAC GAAAGTTAAG TCCTCAAGTA ATTGAACGCT TTCAGTTGGG TTTAGCGTTT
  481  ACTTTAGAAG ACCAGTATTT TCTACCCAGT CTCTTAAACT ATCCCTGAAT TAGCCCGGCA
  541  ATTGAAAAGG CAGAGCTCTG TTTTGCTACT GAAAAATTCC CAGAAGCTTT AGGATTTTTT
  601  AACCAACAAA CGCATTATGC AACCTTTAAG AGCCGGATTA TGATTCCGAT CCATGACCTT
  661  AAGGGTAATC CAGTAGGTTT TTCGGGGCGT GCACTGCAAA AAACGGAAAA GATTAAATAC
  721  AAAAACAGTG CAGAACACCA GTGGTTTAAG AAGAGTGAAT TGTTATTTAA CTTCCACCGG
  781  ATTGATAAAA ACACACTAAA GCTGTATTTA GTTGAGGGTT ACTTCGATGT CTTTGCCCTT
  841  ACTAGCGCTG GGATTGGTGA TGTAGTGGGC TTAATGGGTT TAGCCTTGAG TGAAAGCCAC
  901  ATTATTGCCT TTCAACAGCA ACTAAAAGCG CTAGAAACAG TGGTCTTGGC ACTCGATAAT
  961  GATACAGCGG GTCACGATGC TACTTTTAAG CTATTACAAG AGTTAAACGC ACACGGCATT
 1021  ATTGTGGAAG TGGTCGATTG AAACCAAGCC GCTTACAAAG ACTGGGATGA GTTGTTTTTA
 1081  GCTGAAGGTA GTGATGCGGT TAAAGCTAAG ACTCACAGGG TTTTAAACCT CGTGGAATAC
 1141  TTAGTGGCTT ACTTTAAAAC CAAGGGCTTT GATGAGCGGA TTACCGTCAA TAAAGTTATC
 1201  GACATTATTG CACAAAACCA GAAAGTAACA GCTGACACTA GCTTTAGCCG CTTTTTGTGT
 1261  CAGAAATTAC AGCAATTGTT GCAATACAGT GATGTGGAAA CACTGTTCAC ACAATTACAG
 1321  CAGCAAAAGC TCAAAGTAAA AGTTAATAAA ACTACAACTT TTACCCAAAG AGCCCCGATT
 1381  TACGAATCAG TGGTTGGTGT GGTTGATAAT AGTTTTAGAA ATGAATCGCA GCCGGTTGCC
 1441  ATTACCAAGG AGTTTTTAGT CGAAAACAAC TGAAAGGAGA CCAAGGAACG TGTATTTCAT
 1501  GCTGAAATCT TCGCTTACGT ACTGTTAGAT AAGCAGTTTT TAGTCGAATT AAAGCAATCT
 1561  GATTTAGATG AATTGTTTGC TTCATTGCAA ACACCGTTGT TTGATGTTGC CCTTTTTATT
 1621  GATAAAGCGC GGCTTTATTG AGCTAAGGTG CAAGAGCCTG ATTGGGCTGT GTTTAACAGT
 1681  ATTTTAGGGG AACAACAAGC AATGTTTCCA ACAACTTTTT TAGCGCAAAT TAAGGAGTTC
 1741  TTTTTAAACA AATCACTCTC ATATGACCCT GAGGATTATG AGGAAGATTT ACAGTTTTTT
 1801  CGGCAACTAA TTGTGAAACA AAAAGAGCTT TTAAAATATT TTAAAAGCAT GGTTGAGCAC
 1861  TAA
Download Sequence
Operon 
OP454
Operon location 
420725 - 423493
Protein (mpn353)
Name 
DNA primase (EC 2.7.7.-)
Stable ID 
Mpn353
Molecular Weight 
68200
Isoelectric Point 
7
Localization 
Cytoplasm
Comment -
Sequence 
MTSPTSLDQLKQQIKIAPIVEHYAIKLKKKGKDFVALCPFHADQNPSMTVSVAKNIFKCFSCQVGGDGIAFIQKIDQVDW
KTALNKALSILNLDSQYAVNFYLKEVDPKLKRYWDLHSALVDYYQTRLKLEPKEQGLTYLTETRKLSPQVIERFQLGLAF
TLEDQYFLPSLLNYPWISPAIEKAELCFATEKFPEALGFFNQQTHYATFKSRIMIPIHDLKGNPVGFSGRALQKTEKIKY
KNSAEHQWFKKSELLFNFHRIDKNTLKLYLVEGYFDVFALTSAGIGDVVGLMGLALSESHIIAFQQQLKALETVVLALDN
DTAGHDATFKLLQELNAHGIIVEVVDWNQAAYKDWDELFLAEGSDAVKAKTHRVLNLVEYLVAYFKTKGFDERITVNKVI
DIIAQNQKVTADTSFSRFLCQKLQQLLQYSDVETLFTQLQQQKLKVKVNKTTTFTQRAPIYESVVGVVDNSFRNESQPVA
ITKEFLVENNWKETKERVFHAEIFAYVLLDKQFLVELKQSDLDELFASLQTPLFDVALFIDKARLYWAKVQEPDWAVFNS
ILGEQQAMFPTTFLAQIKEFFLNKSLSYDPEDYEEDLQFFRQLIVKQKELLKYFKSMVEH
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation ImIPIHDLK 213 222 M
GENE/PROTEIN dnaG (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-98 SSF57783 (n.a.) NULL 1.6e-26
1-427 TIGR01391 (IPR006295) DNA primase, DnaG Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:'DNA' == '' ? '': 'DNA';'>'DNA' == '' ? '': 'DNA'; 'replication' == '' ? '': 'replication';

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003896'>'DNA' == '' ? '': 'DNA'; 'primase' == '' ? '': 'primase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003896)

0
3-94 G3DSA:3.90.580.10 (IPR002694) Zinc finger, CHC2-type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006260'>'DNA' == '' ? '': 'DNA'; 'replication' == '' ? '': 'replication'; ('GO' == '' ? '': 'GO';:0006260)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003896'>'DNA' == '' ? '': 'DNA'; 'primase' == '' ? '': 'primase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003896) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008270'>'zinc' == '' ? '': 'zinc'; 'ion' == '' ? '': 'ion'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0008270)

4.6e-27
4-97 PF01807 (IPR002694) Zinc finger, CHC2-type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006260'>'DNA' == '' ? '': 'DNA'; 'replication' == '' ? '': 'replication'; ('GO' == '' ? '': 'GO';:0006260)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003896'>'DNA' == '' ? '': 'DNA'; 'primase' == '' ? '': 'primase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003896) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008270'>'zinc' == '' ? '': 'zinc'; 'ion' == '' ? '': 'ion'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0008270)

2.6e-31
34-88 SM00400 (IPR002694) Zinc finger, CHC2-type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006260'>'DNA' == '' ? '': 'DNA'; 'replication' == '' ? '': 'replication'; ('GO' == '' ? '': 'GO';:0006260)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003896'>'DNA' == '' ? '': 'DNA'; 'primase' == '' ? '': 'primase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003896) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008270'>'zinc' == '' ? '': 'zinc'; 'ion' == '' ? '': 'ion'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0008270)

2.60001e-31
112-436 SSF56731 (n.a.) NULL 0
114-250 G3DSA:3.90.980.10 (IPR013264) DNA primase, catalytic core, N-terminal 3.8e-22
123-261 PF08275 (IPR013264) DNA primase, catalytic core, N-terminal 3.2e-28
251-371 G3DSA:3.40.1360.10 (n.a.) NULL 2.1e-21
266-340 SM00493 (IPR006171) Toprim domain 7.00001e-17
267-345 PF01751 (IPR006171) Toprim domain 0.000000022
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
25 368 343 - MAG2660 Mycoplasma agalactiae 26 353 2e-40 30.5556 399
24 385 361 - MARTH_orf347 Mycoplasma arthritidis 23 371 2e-33 30.9333 339
7 381 374 - Caulobacter crescentus NA1000 8 375 4e-27 26.0546 290
10 385 375 - MCJ_001160 Mycoplasma conjunctivae 10 362 9e-34 29.9233 342
1 386 385 - MHO_2160 Mycoplasma hominis 1 371 2e-35 31.1558 355
7 433 426 - Lactococcus lactis subsp. lactis KF147 9 421 6e-39 28.6353 391
7 345 338 - Bacillus subtilis subsp. subtilis 10 338 2e-39 30.1136 400
7 345 338 - Bacillus subtilis subsp. subtilis 10 338 4.99997e-41 30.3977 412
25 381 356 - b3066 Escherichia coli 27 372 5e-36 28.6104 368
206 375 169 - MG010 Mycoplasma genitalium 53 217 0.000000000002 29.8851 157
1 615 614 - MG250 Mycoplasma genitalium 2 604 <1e-50 45.2648 1406
10 330 320 - Rv2343c Mycobacterium tuberculosis 13 330 5e-21 27.8443 238
7 359 352 - MCAP_0504 Mycoplasma capricolum subsp. capricolum 9 344 9.80909e-45 33.1461 436
8 367 359 - MS53_0453 Mycoplasma synoviae 8 345 <1e-50 32.0106 460
25 387 362 - MHP7448_0059 Mycoplasma hyopneumoniae 7448 24 380 2e-34 29.9492 348
1 385 384 - MMOB2910 Mycoplasma mobile 1 370 4e-39 28.9538 388
3 382 379 - MSC_0465 Mycoplasma mycoides subsp. mycoides SC 5 366 3.99931e-42 31.3316 415
7 345 338 - LIC_11702 Leptospira interrogans serovar Copenhage 8 331 1e-37 32.3699 382
10 368 358 - MYCGA3900 Mycoplasma gallisepticum 12 377 1.96182e-44 30.1266 435
2 408 406 - MYPE3400 Mycoplasma penetrans 6 412 <1e-50 31.0185 491
25 368 343 - Mycoplasma pulmonis 25 350 2e-33 29.5775 341
External IDs
COG 
COG0358L
EC number 
2.7.7.-
Gene ID 
876866
GI 
13508092
GO 
DNA replication, recombination and repair
Home COG 
L
InterPro 
IPR006154|Toprim subdomain
InterPro 
IPR002694|Zinc finger, CHC2-type
InterPro 
IPR013264|DNA primase catalytic core, N-terminal
InterPro 
IPR006647|Toprim, primase
InterPro 
IPR006171|TOPRIM
InterPro 
IPR006295|DNA primase
Old MP number 
MP483
Pathway 
Division, DNA maintenance
PDB homologs 
1dd9_A
PDB homologs 
1dde_A
PDB homologs 
1eqn_A
Pfam 
PF01807
Pfam 
PF09383
Pfam 
PF01751
Pfam 
PF08275
PID 
g1674174
RefSeq 
NP_110041.1
Swiss-Prot protein ID 
PRIM_MYCPN
phylomeDB tree 
PRIM_MYCPN
UniProt 
P75426
Transcription
IMAGE BROWSERS

OPERON OP454 (Genomic Overview)
Region:420725-423493

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STRING image

STRING of Mpn353STRING legend

PDB image(s)

1dd9

PDB 1dd9

1dde

PDB 1dde

1eqn

PDB 1eqn
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