MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene uvrD (MPN340)
Name 
uvrD
Stable ID 
MPN340
Location 
403921 - 405510 +
Sequence 
    1  ATGGAACATT TAAATCAGGA ACAGAAAGCT GCTGTTACTT GTGATAACGG TGTTAACGTG
   61  GTGTATTCCG GTGCTGGCAC GGGTAAAACA ACCGTTATTG CTGAACGCTT TGCTTACTTA
  121  GTCAATGAAA AAGGCGTTAA TCCTCAAAGT ATTTTGGCCT TTACCTTCAC TGATAAGGCA
  181  GCGAGTGAAA TGCGCCAACG CATTATTAAG TTAATTCCAC AAAAAAGCTT GCAGGATCTG
  241  CACATCTATA CCTTTCACAG TTTTGCCAAC AGGTTTTTGC AAAAACATGG CAAAAGTGAC
  301  TTTGCCATCT TGAGCGATTC TAACCGCTTC TTTAGTGATT ATGAAATGGG TGATCAACTA
  361  CAAACAGTGG TGGAAATTTA TAAAAACAAA GTAGTTGATT TAGAACTTGA CAACCTAGAG
  421  TATAACTCCG CTTTTAGAGA TGCTTGTACA GATACTTTTA ACGAGGATTT TAGTACCATC
  481  TCCAATGGTC AGTTTCGTAA ACGGGCTGCG ACTGCTTTAC GGGCTTACCA GAACTATTTA
  541  ATTACCAATA ACCTATTTGA TTTTAGCGAT TTAATTATTG AAACTTGCCA CCTTTTAAAA
  601  GGTAATAGTG AATTGTTGCA AGCATTTACC GAAAGTGTGC ATTATATCTT AGTAGATGAA
  661  TTTCAAGACA CTAACCTAGC CCAGTACGAA TTGGTAAAGT TACTAGCTAC AACTCATCCT
  721  AATCTCTTTT TGGTGGGTGA TAGCAACCAG ATGATTTACG GTTGGCGGGG TGCTGTTGTA
  781  GAGATCTTTG AACTTTTAAA AAATGATTTT CAAGCAGTCA AAGAGTTTTA TACCACCCAA
  841  AACTACCGCA GCATCCAAGC GGTGTTAGCA GTAGCGAATG ATGTACTAAC CGCAATTGCT
  901  AGAAAAGAGA GGAAAGCGCT CGTGTTGTTG CACTCTAGCA TTGATTCTAA AGCTGTACCG
  961  GTACACTATA AGGCCAATTC TTTGAAAAAC CAAGACCAGT GGATTATTTA CCAAATGAAA
 1021  CAGTTGCATT TAAACAATGG TGTACCTTAT GATCAGATGG CGGTGTTATT TCGTAAGAAT
 1081  AAACACCTTG ACGCTTTTAG TCAAACAGTG CTGGAAGATG GTGATTTACC TTTAGCTAAA
 1141  TTAAACCTTT TAACAATTCA CGCTGCCAAG GGTTTGGAAT TTGAGGCAGT ATTTGTTTAT
 1201  GGCTTGGTTG AACGCGCTTT TCCTAGTTTG CACTGGGATG GAAGTGATAA GCACAAGTTA
 1261  CTAGAAGAAA TGAAACTGTT TTACGTAGCG ATTACTCGTG CTAAACAGTT TTTATTTTTA
 1321  GTTTCTGTTA GTGTGGAAAG TTTCAATGCG TATTATGAGC CGTCACGCTT TTTAAAACTA
 1381  ATTGAAAAGG AACATTTGCA AACACAAAAG GCAGCGTACT TTAAAGAACA ATTAAAGACA
 1441  CAGCCAAAAC CAGTTAATTT GTATACAGAG ACAGAAAACG CGGAAAACTT ACAAAAAGCC
 1501  ACTGACTCTA AAAAGTGAAT TATTTTAGGG GCGATTCTTT TGATAATTGT GATTATTACC
 1561  GCTGTGTTAA AACTTTTTGT TGAAAATTAA
Download Sequence
Operon 
OP131
Operon location 
399440 - 408150
Protein (mpn340)
Name 
Probable DNA helicase I homolog (EC 3.6.1.-)
Stable ID 
Mpn340
Molecular Weight 
58190
Isoelectric Point 
7
Localization 
TMHMM
Comment Nucleotide excision repair
Sequence 
MEHLNQEQKAAVTCDNGVNVVYSGAGTGKTTVIAERFAYLVNEKGVNPQSILAFTFTDKAASEMRQRIIKLIPQKSLQDL
HIYTFHSFANRFLQKHGKSDFAILSDSNRFFSDYEMGDQLQTVVEIYKNKVVDLELDNLEYNSAFRDACTDTFNEDFSTI
SNGQFRKRAATALRAYQNYLITNNLFDFSDLIIETCHLLKGNSELLQAFTESVHYILVDEFQDTNLAQYELVKLLATTHP
NLFLVGDSNQMIYGWRGAVVEIFELLKNDFQAVKEFYTTQNYRSIQAVLAVANDVLTAIARKERKALVLLHSSIDSKAVP
VHYKANSLKNQDQWIIYQMKQLHLNNGVPYDQMAVLFRKNKHLDAFSQTVLEDGDLPLAKLNLLTIHAAKGLEFEAVFVY
GLVERAFPSLHWDGSDKHKLLEEMKLFYVAITRAKQFLFLVSVSVESFNAYYEPSRFLKLIEKEHLQTQKAAYFKEQLKT
QPKPVNLYTETENAENLQKATDSKKWIILGAILLIIVIITAVLKLFVEN
Post translational modifications
No post translational modifications were found
GENE/PROTEIN uvrD (Domains Overview)
Click on the features to jump to domain info

 ExportIMG
Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-471 SSF52540 (n.a.) NULL 0
2-285 PS51198 (IPR014016) Helicase, superfamily 1, UvrD-related Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016787'>'hydrolase' == '' ? '': 'hydrolase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0016787)

0
3-272 G3DSA:3.40.50.300 (n.a.) NULL 0
4-384 PF00580 (IPR000212) DNA helicase, UvrD/REP type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006281'>'DNA' == '' ? '': 'DNA'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006281)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004003'>'ATP' == '' ? '': 'ATP';-'dependent' == '' ? '': 'dependent'; 'DNA' == '' ? '': 'DNA'; 'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004003) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)

0
15-434 PTHR11070 (IPR000212) DNA helicase, UvrD/REP type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006281'>'DNA' == '' ? '': 'DNA'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006281)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004003'>'ATP' == '' ? '': 'ATP';-'dependent' == '' ? '': 'dependent'; 'DNA' == '' ? '': 'DNA'; 'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004003) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)

0
279-473 G3DSA:3.40.50.300 (n.a.) NULL 1.8e-39
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
2 373 371 - MAG2990 Mycoplasma agalactiae 16 389 1.99993e-41 30.1266 409
378 459 81 - MAG2990 Mycoplasma agalactiae 566 648 0.0000000001 42.8571 409
2 297 295 - MARTH_orf847 Mycoplasma arthritidis 7 298 3e-33 31.761 337
381 459 78 - MARTH_orf847 Mycoplasma arthritidis 554 652 0.000000002 39.2157 337
1 368 367 - Caulobacter crescentus NA1000 46 407 5.60519e-45 31.7333 444
383 506 123 - Caulobacter crescentus NA1000 588 716 0.00000002 29.4574 444
4 406 402 - MCJ_002700 Mycoplasma conjunctivae 1 405 2.99878e-43 30.2158 423
381 479 98 - MCJ_002700 Mycoplasma conjunctivae 568 676 0.00000000005 35.7798 423
1 376 375 - MHO_4520 Mycoplasma hominis 4 388 3e-36 28.8945 362
277 472 195 - MHO_4520 Mycoplasma hominis 454 674 0.0000001 29.0749 362
176 296 120 - Lactococcus lactis subsp. lactis KF147 357 483 0.000000000007 32.8125 156
1 360 359 - Lactococcus lactis subsp. lactis KF147 5 357 <1e-50 34.2391 474
380 467 87 - Lactococcus lactis subsp. lactis KF147 564 653 0.000000000006 40.6593 474
4 360 356 - Bacillus subtilis subsp. subtilis 94 442 3e-32 28.7671 337
381 458 77 - Bacillus subtilis subsp. subtilis 624 704 0.00000001 43.9024 337
183 263 80 - Bacillus subtilis subsp. subtilis 363 454 0.00000003 40.8602 129
1 374 373 - Bacillus subtilis subsp. subtilis 9 375 <1e-50 33.7766 479
381 486 105 - Bacillus subtilis subsp. subtilis 560 672 0.0000001 37.6068 479
183 293 110 - Bacillus subtilis subsp. subtilis 363 489 0.00000003 34.375 130
1 374 373 - Bacillus subtilis subsp. subtilis 9 375 <1e-50 33.7766 480
381 506 125 - Bacillus subtilis subsp. subtilis 560 699 0.0000001 34.7222 480
4 360 356 - Bacillus subtilis subsp. subtilis 136 484 4e-32 28.4932 335
381 458 77 - Bacillus subtilis subsp. subtilis 666 746 0.00000002 43.9024 335
7 403 396 - MT3295 Mycobacterium tuberculosis 27 460 3e-19 23.5165 222
1 358 357 - MT3296 Mycobacterium tuberculosis 1 395 0.00000000000002 23.5437 182
1 372 371 - b3813 Escherichia coli 7 369 9.99995e-41 30.5699 408
363 467 104 - b3813 Escherichia coli 531 642 0.0000000001 37.1681 408
3 373 370 - b3778 Escherichia coli 2 365 3e-38 32.1716 386
378 487 109 - b3778 Escherichia coli 549 663 0.00000002 35.0427 386
1 374 373 - Rv0949 Mycobacterium tuberculosis 20 397 2.94273e-44 30.4348 438
381 484 103 - Rv0949 Mycobacterium tuberculosis 593 689 0.0000000002 38.1818 438
4 462 458 - b0962 Escherichia coli 197 674 3e-17 23.7094 206
10 368 358 - MCAP_0717 Mycoplasma capricolum subsp. capricolum 17 366 3.00004e-41 31.7333 406
378 495 117 - MCAP_0717 Mycoplasma capricolum subsp. capricolum 552 681 0.00000000004 35.1145 406
4 380 376 - MG244 Mycoplasma genitalium 1 385 <1e-50 43.3333 806
381 477 96 - MG244 Mycoplasma genitalium 532 629 3e-20 51.5152 806
1 374 373 - Rv3198c Mycobacterium tuberculosis 9 389 4e-20 23.8095 230
381 464 83 - Rv3198c Mycobacterium tuberculosis 496 583 0.000000003 38.6364 230
19 340 321 - Rv0630c Mycobacterium tuberculosis 17 373 0.00000000005 22.9333 152
1 374 373 - MS53_0544 Mycoplasma synoviae 10 382 2e-38 30.3665 382
381 459 78 - MS53_0544 Mycoplasma synoviae 562 654 0.0000000001 40.2062 382
3 360 357 - MHP7448_0403 Mycoplasma hyopneumoniae 7448 9 372 <1e-50 32.4468 449
380 455 75 - MHP7448_0403 Mycoplasma hyopneumoniae 7448 579 648 0.0000000001 41.5584 449
1 366 365 - MMOB4910 Mycoplasma mobile 24 385 3e-32 25.9259 329
377 461 84 - MMOB4910 Mycoplasma mobile 577 671 0.000004 35.4167 329
1 374 373 - MMOB4890 Mycoplasma mobile 9 374 1e-39 30.6069 392
381 458 77 - MMOB4890 Mycoplasma mobile 551 633 0.000000001 44.0476 392
1 368 367 - MSC_0769 Mycoplasma mycoides subsp. mycoides SC 7 366 4.00001e-40 30.343 397
378 495 117 - MSC_0769 Mycoplasma mycoides subsp. mycoides SC 552 681 0.000000000004 35.8779 397
23 325 302 - LIC_12686 Leptospira interrogans serovar Copenhage 3 325 8e-19 25.731 218
380 466 86 - LIC_12588 Leptospira interrogans serovar Copenhage 559 647 0.00000002 36.6667 383
4 370 366 - LIC_12588 Leptospira interrogans serovar Copenhage 3 363 5e-38 28.836 383
373 462 89 - LIC_11732 Leptospira interrogans serovar Copenhage 545 628 0.00000000002 46.2366 348
2 382 380 - LIC_11732 Leptospira interrogans serovar Copenhage 12 388 6e-34 31.358 348
381 496 115 - LIC_11624 Leptospira interrogans serovar Copenhage 549 666 0.00000000006 35.2941 374
1 374 373 - LIC_11624 Leptospira interrogans serovar Copenhage 6 370 7e-37 29.9479 374
21 447 426 - LIC_10420 Leptospira interrogans serovar Copenhage 24 408 2e-25 26.9231 275
1 372 371 - MYCGA3800 Mycoplasma gallisepticum 5 382 5.99994e-41 32.5581 404
363 458 95 - MYCGA3800 Mycoplasma gallisepticum 543 649 0.00000000001 40.367 404
2 360 358 - MYPE8910 Mycoplasma penetrans 7 369 <1e-50 33.4232 448
381 475 94 - MYPE8910 Mycoplasma penetrans 561 661 0.00000000002 40.3846 448
4 331 327 - Mycoplasma pulmonis 24 360 9e-37 32.5581 368
381 458 77 - Mycoplasma pulmonis 572 656 0.000000002 43.6782 368
1 362 361 - Mycoplasma pulmonis 2 355 1.99993e-41 32.626 408
380 442 62 - Mycoplasma pulmonis 547 611 0.0000000004 46.9697 408
External IDs
COG 
COG0210L
EC number
EC number 
3.6.1.-
Gene ID 
876772
GI 
13508079
GO 
DNA replication, recombination and repair
Home COG 
L
InterPro 
IPR014016|Helicase superfamily 1, UvrD-related
InterPro 
IPR000212|UvrD/REP helicase
Old MP number 
MP496
Pathway 
Division, DNA maintenance
PDB homologs 
3pjr_A
PDB homologs 
1pjr_
PDB homologs 
1qhg_A:1
Pfam 
PF00580
PID 
g1674189
RefSeq 
NP_110028.1
Swiss-Prot protein ID 
Y340_MYCPN
phylomeDB tree 
Y340_MYCPN
UniProt 
P75438
Transcription
IMAGE BROWSERS

OPERON OP131 (Genomic Overview)
Region:399440-408150

Click on the features to jump to a different MyMpn page

 ExportIMG MyGBrowser GBrowse
STRING image

STRING of Mpn340STRING legend

PDB image(s)

3pjr

PDB 3pjr

1pjr

PDB 1pjr

1qhg

PDB 1qhg
Site hosted by:
Copyright 2010-16, Luis Serrano group. All rights reserved.
All data provided for download in the MyMpn database is free to use. Upon doing so, please cite the original data source and the MyMpn database
CONTACT US