MyMpn Project

Name	scpB
Stable ID	MPN301
Location	355039 - 355665 +
Sequence	1 ATGGACGCGA CAATTAAGGT AACTAAACCC GTTTTAAAAC AAAAGGATAG CAGCGCTGCT 61 AATTTAGTTG CTGCCATTTA TGGGTTGTTG TTTGTAAGTG GCGAAAAGGG CTTAACGTTA 121 GCGGAATTAA ACCGCGTATT GCGCAAGGTG GGTTTGGAAA AGATTAAGGC CGCTTTAGTG 181 CAGTTAGAGC GCAAGTTAAG TTTAGATGAT GAAAGCGGGA TTGAAATTAA AAAGTTTGGT 241 CACAGCTTTC GCTTGGTCAC CAAAATGGAG ATCAAGGACT TTATCCACCG TTACCTACCC 301 AACAAGATTA AAAATCCGCT CAATTCCAAA ACAATGGAAG TGTTAGCAAT TATTGCTTAC 361 AACCAACCCT GCACCCGTCC GCGCATTAAT GAAATTAGGG GTGCAGATTC CTTTCAGATT 421 GTCGATGACT TACTAGAAAA GGAGTTAATT GTTGAATTGG GCCGCAAAGA CACACCTGGT 481 CGTCCCTTTA TTTATGAAGT GTCGCCTAAG TTCTATGATC TGTTTGGGAT TAACAGCTTG 541 GATGAACTGC CTAAAGTCGA GAATTTTGAT CTCGACAAAT TCCGCCAAGG TAGCTTTTTT 601 GACTCTAACC GTTACGGGGA TGATTAA
Download Sequence
Operon	OP119
Operon location	348825 - 355675

MDATIKVTKPVLKQKDSSAANLVAAIYGLLFVSGEKGLTLAELNRVLRKVGLEKIKAALVQLERKLSLDDESGIEIKKFG

HSFRLVTKMEIKDFIHRYLPNKIKNPLNSKTMEVLAIIAYNQPCTRPRINEIRGADSFQIVDDLLEKELIVELGRKDTPG

RPFIYEVSPKFYDLFGINSLDELPKVENFDLDKFRQGSFFDSNRYGDD

Name	Segregation and condensation protein B
Stable ID	Mpn301
Molecular Weight	22880
Isoelectric Point	9
Localization	Cytoplasm
Comment	-
Sequence	MDATIKVTKPVLKQKDSSAANLVAAIYGLLFVSGEKGLTLAELNRVLRKVGLEKIKAALVQLERKLSLDDESGIEIKKFG HSFRLVTKMEIKDFIHRYLPNKIKNPLNSKTMEVLAIIAYNQPCTRPRINEIRGADSFQIVDDLLEKELIVELGRKDTPG RPFIYEVSPKFYDLFGINSLDELPKVENFDLDKFRQGSFFDSNRYGDD

Modification	Modified sequence	Relative start	Relative end	Amino acid
Oxidation	mDATIKVTKPVLK	1	14	M
Oxidation	LVTKmEIKDFIHR	85	98	M
Oxidation	mEIKDFIHR	89	98	M
Oxidation	TmEVLAIIAYNQPcTRPR	111	129	M

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
1-208	PIRSF019345 (IPR005234)	Chromosome segregation/condensation protein ScpB,	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0051304'>'chromosome' == '' ? '': 'chromosome'; 'separation' == '' ? '': 'separation'; ('GO' == '' ? '': 'GO';:0051304)		0
15-100	SSF46785 (n.a.)	NULL			0.000000000091
20-99	G3DSA:1.10.10.10 (IPR011991)	Winged helix-turn-helix transcription repressor DN			0.0000000000095
21-208	TIGR00281 (IPR005234)	Chromosome segregation/condensation protein ScpB,	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0051304'>'chromosome' == '' ? '': 'chromosome'; 'separation' == '' ? '': 'separation'; ('GO' == '' ? '': 'GO';:0051304)		0
25-185	PF04079 (IPR005234)	Chromosome segregation/condensation protein ScpB,	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0051304'>'chromosome' == '' ? '': 'chromosome'; 'separation' == '' ? '': 'separation'; ('GO' == '' ? '': 'GO';:0051304)		4.2039e-45
101-177	SSF46785 (n.a.)	NULL			3.49999e-24
104-177	G3DSA:1.10.10.10 (IPR011991)	Winged helix-turn-helix transcription repressor DN			3.5e-26

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
28	190	162	- MAG7200	Mycoplasma agalactiae	8	169	4e-25	33.7423	262
28	208	180	- MARTH_orf011	Mycoplasma arthritidis	8	193	5e-24	34.7594	253
73	186	113	-	Caulobacter crescentus NA1000	54	166	0.000002	32.4786	107
30	193	163	- MCJ_001250	Mycoplasma conjunctivae	1	164	3e-25	37.2093	263
26	190	164	- MHO_0410	Mycoplasma hominis	6	169	6e-24	35.7576	251
21	187	166	-	Lactococcus lactis subsp. lactis KF147	2	167	1e-27	37.1257	289
21	202	181	-	Bacillus subtilis subsp. subtilis	7	188	4e-24	37.8947	262
21	202	181	-	Bacillus subtilis subsp. subtilis	7	188	4e-24	37.8947	262
71	186	115	- MT1751	Mycobacterium tuberculosis	74	188	0.00000000000006	28.4483	172
1	208	207	- MG214	Mycoplasma genitalium	1	207	<1e-50	73.0769	801
24	198	174	- MCAP_0601	Mycoplasma capricolum subsp. capricolum	7	183	1e-19	32.2222	216
26	201	175	- MS53_0095	Mycoplasma synoviae	6	181	2e-26	36.1582	275
26	191	165	- MHP7448_0633	Mycoplasma hyopneumoniae 7448	6	171	2e-25	39.6552	265
26	190	164	- MMOB4760	Mycoplasma mobile	6	169	3e-28	35.7576	289
24	191	167	- MSC_0386	Mycoplasma mycoides subsp. mycoides SC	7	176	1e-20	34.104	226
26	190	164	- LIC_12452	Leptospira interrogans serovar Copenhage	12	181	9e-20	33.908	222
6	208	202	- MYCGA4020	Mycoplasma gallisepticum	91	290	<1e-50	49.2611	530
19	204	185	- MYPE390	Mycoplasma penetrans	2	191	4e-31	34.1969	316
26	191	165	-	Mycoplasma pulmonis	17	181	9e-24	35.7143	252

Gene ID	877283
GI	13508040
GO	Cell division and chromosome partitioning
Home COG	D
InterPro	IPR005234\|Prokaryotic chromosome segregation and condensation protein ScpB
Old MP number	MP535
Pathway	Division, DNA maintenance and repair
Pfam	PF04079
PID	g1674231
RefSeq	NP_109989.1
Swiss-Prot protein ID	SCPB_MYCPN
phylomeDB tree	SCPB_MYCPN
UniProt	P75477