MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rbsC (MPN260)
Name 
rbsC
Stable ID 
MPN260
Location 
311284 - 312219 +
Sequence 
    1  ATGTCACAGT CTTTAATTTC TTTTAGTAAC TTAGATAACT GGTTGTTTGT CGCTCCTGCA
   61  CTGCTACTCG CTGTATTGAG TGGTTACTTA TCTGAGCGGG TTGGTATTGT CAATATTGCC
  121  ATTAACGGGG GCATGGTGTT TGGCGGGATG TTCTTATCCT TAATGTCTTA TGCCTTTGTG
  181  CCCAATGCAA ATGATTCTGC ACCATCTTGA TCACTAGCAA TAAGCATCCC TTTAAGTGTT
  241  ATCTTTGCCT CAGCTGTTGG TTTTCTGTTT GGCATTGCCG CCATTAAACT CAAAGCCGAT
  301  CACGTGATTG TTGGCACAGG GGTTAACTTA CTGGGCACGG GAATTAATTT CTTTGTGGCA
  361  CAAAATGCCC GCTCATTGCT TAACGATACT GATTTAAGGG TACGATACAG CTTTGTAAGA
  421  ACAGGAAACT CTGTAAGTAT TGAGGGTATA GCAATCTTTG CCTTTGCAAT TATCTTTGTT
  481  TTATTAGTGT GGTATTTGAT GAACTTTACT AAAACGGGCT TGCGTTACCG TGCTGTTGGG
  541  GAAAATCCTA ATGTGATTGA TACCCAAGGT ATTAGTGTGT ATAAATACCA GTGGTTTGGG
  601  GTAATGGCTT CGACGATGGT AGCAGCTTTA GCGGGTTGTT GTTTTGCTTT AAGTCCACAG
  661  GTACCTAGCT TTTCTAGCGG GGATGTGAGC GGGTTTGGTT TTATTGCCAT TGCCATTATG
  721  ATCATTTCGA TGTGACGAAT TATCCCAAGT ATTGTGATCT CGCCCTTGTT TGCACTAGCT
  781  TATGTGCTTA CTACCGGTGT GGTAGGTAAT GCTAATAACA CTTACTTATT GAGAACTATT
  841  CCGTTTATTA TTTCGCTGTT GGTAATGATG GTATTTGGAT ATCTCAATGT AGGGCCGAAA
  901  AACGTTGGTA AGCATTTCGA TAAGGGTTTG CGATAG
Download Sequence
Operon 
OP103
Operon location 
307970 - 315844
Protein (mpn260)
Name 
Sugar (ribose/galactose) ABC transporter permease subunit
Stable ID 
Mpn260
Molecular Weight 
34210
Isoelectric Point 
10
Localization 
TMHMM
Comment TC 3.A.1.2.1
Sequence 
MSQSLISFSNLDNWLFVAPALLLAVLSGYLSERVGIVNIAINGGMVFGGMFLSLMSYAFVPNANDSAPSWSLAISIPLSV
IFASAVGFLFGIAAIKLKADHVIVGTGVNLLGTGINFFVAQNARSLLNDTDLRVRYSFVRTGNSVSIEGIAIFAFAIIFV
LLVWYLMNFTKTGLRYRAVGENPNVIDTQGISVYKYQWFGVMASTMVAALAGCCFALSPQVPSFSSGDVSGFGFIAIAIM
IISMWRIIPSIVISPLFALAYVLTTGVVGNANNTYLLRTIPFIISLLVMMVFGYLNVGPKNVGKHFDKGLR
Post translational modifications
No post translational modifications were found
GENE/PROTEIN rbsC (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
10-285 PF02653 (IPR001851) ABC transporter permease Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006810'>'transport' == '' ? '': 'transport'; ('GO' == '' ? '': 'GO';:0006810)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016020'>'membrane' == '' ? '': 'membrane'; ('GO' == '' ? '': 'GO';:0016020)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005215'>'transporter' == '' ? '': 'transporter'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0005215)

9.80909e-45
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
27 216 189 - MAG0160 Mycoplasma agalactiae 24 220 2e-23 36.5854 250
28 311 283 - MARTH_orf823 Mycoplasma arthritidis 28 319 3e-21 26.4407 231
27 215 188 - MCJ_007020 Mycoplasma conjunctivae 23 208 2e-16 28.5 190
28 198 170 - Lactococcus lactis subsp. lactis KF147 28 202 0.000000000000001 30.9783 186
28 204 176 - Bacillus subtilis subsp. subtilis 28 209 0.000000000003 28.7234 162
28 204 176 - Bacillus subtilis subsp. subtilis 28 209 0.0000000000003 29.7872 169
5 311 306 - MG121 Mycoplasma genitalium 1 306 <1e-50 55.5195 834
27 218 191 - MCAP_0039 Mycoplasma capricolum subsp. capricolum 26 225 7e-18 28.2178 203
27 311 284 - MS53_0139 Mycoplasma synoviae 25 317 4e-24 27.0627 256
27 311 284 - MHP7448_0607 Mycoplasma hyopneumoniae 7448 26 303 7e-20 26.5306 220
27 204 177 - MMOB0390 Mycoplasma mobile 24 196 2e-21 35.1351 233
27 311 284 - MSC_0008 Mycoplasma mycoides subsp. mycoides SC 26 325 3e-19 26.9737 215
5 311 306 - MYCGA5870 Mycoplasma gallisepticum 1 310 <1e-50 38.9068 465
10 311 301 - MYPE5870 Mycoplasma penetrans 3 309 <1e-50 37.4194 473
27 311 284 - Mycoplasma pulmonis 24 312 1e-25 30.1325 269
External IDs
COG 
COG1079R
Gene ID 
877290
GI 
13507999
GO 
Carbohydrate transport and metabolism
Home COG 
G
InterPro 
IPR001851|Bacterial inner-membrane translocator
Old MP number 
MP573
Pathway 
ribose/galactose transport, subunit
Pathway 
Transporters, ABC superfamily
Pfam 
PF02653
PID 
g1674273
RefSeq 
NP_109948.1
Swiss-Prot protein ID 
Y260_MYCPN
phylomeDB tree 
Y260_MYCPN
UniProt 
P75514
Transcription
IMAGE BROWSERS

OPERON OP103 (Genomic Overview)
Region:307970-315844

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STRING image

STRING of Mpn260STRING legend

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