MyMpn Project

Gene rplR (MPN181)

Name	rplR
Stable ID	MPN181
Location	226051 - 226401 +
Sequence	1 ATGAAAACAC GAACAGAACA ACGGCGCTTA CGCCATAAAA GGATTGTGAA GAAGATCCGC 61 GCCACTAACC ACGACAACCG CGTTGTGTTA ATGGTGATTA AGTCCTTAAA CCATATTAGT 121 GTGCAAGCGT GGGACTTTTC CCAGAACATT GTTTTAGCGT CCTCTTCCTC ACTTGCTTTA 181 AAATTAAAGA ATGGTAACAA GGACAATGCC AAGTTAGTGG GGCAAGACAT TGCTGATAAA 241 CTAGTGAAGC TCAAACTAAC CAACGTTGTC TTTGACACTG GTGGTAGTAA GTACCACGGC 301 CGGATTGCGG CATTGGCCGA AGCAGCCCGC GAAAGGGGGT TAAACTTCTA A
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Operon	OP78
Operon location	217550 - 229680

Protein (mpn181)

Name	50S ribosomal protein L18
Stable ID	Mpn181
Molecular Weight	12760
Isoelectric Point	12
Localization	Cytoplasm
Comment	-
Sequence	MKTRTEQRRLRHKRIVKKIRATNHDNRVVLMVIKSLNHISVQAWDFSQNIVLASSSSLALKLKNGNKDNAKLVGQDIADK LVKLKLTNVVFDTGGSKYHGRIAALAEAARERGLNF

Post translational modifications

Modification	Modified sequence	Relative start	Relative end	Amino acid
Oxidation	ATNHDNRVVLmVIK	21	35	M
Oxidation	VVLmVIK	28	35	M

GENE/PROTEIN rplR (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
3-116	G3DSA:3.30.420.100 (n.a.)	NULL			1.1e-29
4-116	TIGR00060 (IPR004389)	Ribosomal protein L18, bacterial	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412) Cellular Component: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)		0
6-116	PF00861 (IPR005484)	Ribosomal protein L18/L5	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412) Cellular Component: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)		2.2e-28
27-116	SSF53137 (n.a.)	NULL			3.80001e-28

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	99	98	- MARTH_orf425	Mycoplasma arthritidis	1	98	0.00000007	31	110
3	99	96	- MAG5310	Mycoplasma agalactiae	5	99	0.0000002	28.866	106
4	99	95	- MYCGA0670	Mycoplasma gallisepticum	8	102	7e-24	51.0417	249
3	99	96	- MG167	Mycoplasma genitalium	2	98	1e-32	67.0103	323
1	99	98	- MHO_2820	Mycoplasma hominis	1	98	0.000005	31	94
3	99	96	- MMOB2510	Mycoplasma mobile	6	100	0.000002	31.9588	97
4	99	95	- MYPE10010	Mycoplasma penetrans	8	102	0.0000000003	39.5833	132

External IDs

COG	COG0256J
Gene ID	876739
GI	13507920
GO	Translation, ribosomal structure and biogenesis
Home COG	J
InterPro	IPR004389\|Ribosomal protein L18
InterPro	IPR005484\|Ribosomal protein L18P/L5E
Old MP number	MP650
Pathway	Translation
PDB homologs	1ovy_A
PDB homologs	1ily_A
PDB homologs	1ffk_K
Pfam	PF00861
PID	g1674355
RefSeq	NP_109869.1
Swiss-Prot protein ID	RL18_MYCPN
phylomeDB tree	RL18_MYCPN
UniProt	Q50302

Transcription

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OPERON OP78 (Genomic Overview)

Region:217550-229680

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STRING image

STRING legend

PDB image(s)

PDB 1ovy

PDB 1ily

PDB 1ffk