MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rplC (MPN165)
Name 
rplC
Stable ID 
MPN165
Location 
217970 - 218833 +
Sequence 
    1  ATGGAAATTC GTGGTATTTT TGGGGTTAAA GTAGGCATGA GCCAGGTGTT TACAACCAAT
   61  AATGAGCGCC TACCTATTAC CGTTATTTAT TGTGAACCTA ACCAGGTAGC AGGTGTTAAG
  121  ACTGAGGCTA AGGACAAGTA CAGTGCTACC TTGTTGAGTT TTGACACCGT TGAAAACAAA
  181  AAGCTCAACA AGCCTCAACA AGGCTTCTTT GAAAAAAACA ACTTAAAGCC AACCAAGCAC
  241  TTACAGGAAA TCCGCAATAT GACCGGGTTT GAAATGGGGC AACAAATCAC ACCGCAAAAT
  301  CTCTTCCAAG TGGGTGAGTA TGTTGATGTA AGTGCCATTA GTAAAGGTCG TGGGTTTACT
  361  GGTGCCATTA AGCGCTGGAA CTTTAAGATC GGTCCGTTAG GTCATGGGGC TGGTTATCCC
  421  CACCGCTTCC AAGGTTCAGT CCAAGCTGGT CGTGGGGGTG CGAGTGCACA AAGAGTGTTT
  481  AAGGGCAAAA AGATGTCCGG ACACTATGGT CATGAAAAAG TAACGGTACA AAACTTACGC
  541  ATTGTTGGTT TTGATGAAGC TAACATGTTG GTATTAGTAT CAGGGGCGAT CGCAGGTCCT
  601  GAAGGTGGTG TGGTCTTAAT CCGTACCGCT AAGAAAAAAC CGGGGGTAGT GAAACCAATT
  661  GAGTTAGCTG TTCAAACCGA AAAGGCACCG GAAGCAAAAC CGGCCAAGCT TTCCAAAAAG
  721  AAACAAGCCA AGGAGTTAGC GAAAGCACAA GCAGCTAACC AGCAAACTGT TGAAGCTAAG
  781  GTAGACACTC CAGTAGTAGA ACCAAAACCA ACTGAAGTTA AAAAAGCAGC ACCAGTTGTA
  841  GAAAAGAAAG GGGAAGATAA ATAA
Download Sequence
Operon 
OP78
Operon location 
217550 - 229680
Protein (mpn165)
Name 
50S ribosomal protein L3
Stable ID 
Mpn165
Molecular Weight 
31570
Isoelectric Point 
11
Localization 
Cytoplasm
Comment -
Sequence 
MEIRGIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNKPQQGFFEKNNLKPTKH
LQEIRNMTGFEMGQQITPQNLFQVGEYVDVSAISKGRGFTGAIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVF
KGKKMSGHYGHEKVTVQNLRIVGFDEANMLVLVSGAIAGPEGGVVLIRTAKKKPGVVKPIELAVQTEKAPEAKPAKLSKK
KQAKELAKAQAANQQTVEAKVDTPVVEPKPTEVKKAAPVVEKKGEDK
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation VGmSQVFTTNNEr 11 24 M
Oxidation VGmSQVFTTNNER 11 24 M
Oxidation VGmSQVFTTNNERLPITVIYcEPNQVAGVK 11 41 M
Oxidation KmSGHYGHEKVTVQNLR 164 181 M
Oxidation mSGHYGHEKVTVQNLR 165 181 M
Oxidation IVGFDEANmLVLVSGAIAGPEGGVVLIR 181 209 M
GENE/PROTEIN rplC (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
2-235 SSF50447 (IPR009000) Translation elongation/initiation factor/Ribosomal 0
2-238 PTHR11229 (n.a.) NULL 0
5-34 G3DSA:2.40.30.10 (n.a.) NULL 0.0000000000041
5-208 TIGR03625 (IPR019927) Ribosomal protein L3, bacterial/organelle-type Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

0
10-208 PF00297 (IPR000597) Ribosomal protein L3 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

6e-29
86-161 G3DSA:4.10.960.10 (n.a.) NULL 1.8e-20
102-125 PS00474 (IPR019926) Ribosomal protein L3, conserved site 0
162-214 G3DSA:2.40.30.10 (n.a.) NULL 0.0000000000041
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
3 212 209 - MAG5460 Mycoplasma agalactiae 1 208 6.02558e-44 44.1315 426
3 212 209 - MARTH_orf444 Mycoplasma arthritidis 1 208 <1e-50 45.0704 449
5 213 208 - Caulobacter crescentus NA1000 21 227 1e-29 35.545 308
3 213 210 - MCJ_001310 Mycoplasma conjunctivae 1 209 2.00386e-43 42.5234 422
3 212 209 - MHO_2980 Mycoplasma hominis 1 208 1.4013e-45 43.1925 440
4 212 208 - Lactococcus lactis subsp. lactis KF147 3 205 2e-38 41.1483 383
13 212 199 - Bacillus subtilis subsp. subtilis 1 196 1e-35 40.5941 363
4 212 208 - Bacillus subtilis subsp. subtilis 3 207 7e-39 41.2322 391
3 224 221 - MYCGA0510 Mycoplasma gallisepticum 1 222 <1e-50 57.6577 657
3 222 219 - MCAP_0696 Mycoplasma capricolum subsp. capricolum 1 214 <1e-50 44.5455 461
1 226 225 - MG151 Mycoplasma genitalium 1 226 <1e-50 77.8761 963
5 212 207 - b3320 Escherichia coli 3 208 3e-35 39.0476 357
1 213 212 - Rv0701 Mycobacterium tuberculosis 1 214 2e-40 38.9908 402
3 212 209 - MS53_0643 Mycoplasma synoviae 1 208 4.06377e-44 44.6009 428
3 224 221 - MHP7448_0194 Mycoplasma hyopneumoniae 7448 1 220 8.00001e-41 40.708 400
3 222 219 - MMOB2350 Mycoplasma mobile 1 218 2e-36 40.625 361
3 222 219 - MSC_0745 Mycoplasma mycoides subsp. mycoides SC 1 214 <1e-50 44.0909 450
4 207 203 - LIC_12873 Leptospira interrogans serovar Copenhage 3 203 6e-27 36.5854 285
3 223 220 - MYPE10180 Mycoplasma penetrans 1 220 <1e-50 51.1312 604
3 224 221 - Mycoplasma pulmonis 1 223 4.99997e-41 43.4211 402
External IDs
Gene ID 
877186
GI 
13507904
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR009000|Translation factor
InterPro 
IPR000597|Ribosomal protein L3
Old MP number 
MP666
Pathway 
Translation
PDB homologs 
1p86_B
PDB homologs 
1p85_B
PDB homologs 
1pnu_B
Pfam 
PF00297
PID 
g1674371
RefSeq 
NP_109853.1
Swiss-Prot protein ID 
RL3_MYCPN
phylomeDB tree 
RL3_MYCPN
UniProt 
P75580
Transcription
IMAGE BROWSERS

OPERON OP78 (Genomic Overview)
Region:217550-229680

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STRING image

STRING of Mpn165STRING legend

PDB image(s)

1p86

PDB 1p86

1p85

PDB 1p85

1pnu

PDB 1pnu
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