MyMpn Project

Gene rbfA (MPN156)

Name	rbfA
Stable ID	MPN156
Location	209560 - 209910 +
Sequence	1 ATGGCTAGTT ACAAAAAGGA ACGTCTGGAA AACGACATTA TTCGTTTAAT TAACCGCACT 61 GTTATTCACG AAATCTACAA CGAAACGGTC AAAACCGGTC ATGTAACCCA CGTGAAACTA 121 TCGGATGATT TACTCCATGT AACAGTTTAC CTAGACTGTT ATAACCGTGA GCAAATTGAC 181 CGCGTGGTGG GTGCCTTTAA CCAGGCCAAA GGGGTGTTTA GCCGCGTGTT AGCACACAAT 241 TTGTACTTAG CCAAAGCCGT GCAAATCCAT TTTGTCAAGG ACAAAGCAAT TGATAACGCA 301 ATGCGCATTG AGTCTATCAT CAACTCCCTT AAAAAATCAA AGCCTAATTA A
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Operon	OP73
Operon location	207525 - 211980

Protein (mpn156)

Name	Ribosome-binding factor A
Stable ID	Mpn156
Molecular Weight	12760
Isoelectric Point	10
Localization	Cytoplasm
Comment	-
Sequence	MASYKKERLENDIIRLINRTVIHEIYNETVKTGHVTHVKLSDDLLHVTVYLDCYNREQIDRVVGAFNQAKGVFSRVLAHN LYLAKAVQIHFVKDKAIDNAMRIESIINSLKKSKPN

Post translational modifications

No post translational modifications were found

GENE/PROTEIN rbfA (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
1-113	TIGR00082 (IPR000238)	Ribosome-binding factor A	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006364'>'rRNA' == '' ? '': 'rRNA'; 'processing' == '' ? '': 'processing'; ('GO' == '' ? '': 'GO';:0006364)		0
1-114	G3DSA:3.30.300.20 (IPR015946)	K homology domain-like, alpha/beta			5.2e-27
5-107	PF02033 (IPR000238)	Ribosome-binding factor A	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006364'>'rRNA' == '' ? '': 'rRNA'; 'processing' == '' ? '': 'processing'; ('GO' == '' ? '': 'GO';:0006364)		5.5e-17
6-101	SSF89919 (IPR000238)	Ribosome-binding factor A	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006364'>'rRNA' == '' ? '': 'rRNA'; 'processing' == '' ? '': 'processing'; ('GO' == '' ? '': 'GO';:0006364)		3.69999e-21
7-94	PD007327 (IPR000238)	Ribosome-binding factor A	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006364'>'rRNA' == '' ? '': 'rRNA'; 'processing' == '' ? '': 'processing'; ('GO' == '' ? '': 'GO';:0006364)		0
73-94	PS01319 (IPR020053)	Ribosome-binding factor A, conserved site	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006364'>'rRNA' == '' ? '': 'rRNA'; 'processing' == '' ? '': 'processing'; ('GO' == '' ? '': 'GO';:0006364)		0

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
8	111	103	- MAG7290	Mycoplasma agalactiae	9	110	0.00000002	32.6923	115
3	110	107	-	Lactococcus lactis subsp. lactis KF147	4	113	0.0000002	25.4545	110
1	111	110	- MG143	Mycoplasma genitalium	1	111	2.94273e-44	70.2703	423
7	111	104	- MS53_0082	Mycoplasma synoviae	7	109	0.000001	29.5238	99
1	114	113	- MYCGA1160	Mycoplasma gallisepticum	3	116	0.00000000000006	33.3333	163
1	111	110	- MYPE1120	Mycoplasma penetrans	4	114	0.00000000000002	36.036	169
1	114	113	-	Mycoplasma pulmonis	1	112	0.00000001	31.0345	118

External IDs

COG	COG0858J
Gene ID	877289
GI	13507895
GO	Translation, ribosomal structure and biogenesis
Home COG	J
InterPro	IPR000238\|Ribosome-binding factor A
Old MP number	MP675
Pathway	Translation
PDB homologs	1pa4_A
Pfam	PF02033
PID	g1674381
RefSeq	NP_109844.1
Swiss-Prot protein ID	RBFA_MYCPN
phylomeDB tree	RBFA_MYCPN
UniProt	P75589

Transcription

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OPERON OP73 (Genomic Overview)

Region:207525-211980

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STRING image

STRING legend

PDB image(s)

PDB 1pa4