MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene yabC (MPN071)
Name 
yabC
Stable ID 
MPN071
Location 
85598 - 86428 -
Sequence 
    1  ATGCCAGCTC TTAAAGTAAT TGCCACCCCC ATTGGCAACA TTGAGGAAGT TAGTCCGCGA
   61  GTTAAAGCGG CTTTAACCAA GTGTGAAGTG CTCTTTTGTG AGGACACCAG AGTAACCAAA
  121  AAACTCTTGG GCTTACTCGG CATTGACTTT TCAAATAAAC AGTTCATTAT TAACAACGAG
  181  TTTAAGGAAA AGCAAAACTT AAGTAAGGTA GCTAACTTAA TCCACCAGTA TCACTGTGGT
  241  TTGGTCAGTG ATGCGGGTTA TCCCTCAGTA TCCGATCCCG GGCACATATT GGTGGAGTAT
  301  GTCAGAACGC AACTACCCCA AATCGCAATA GAAGTAATTA ATGGTCCTAG TGCGCTGGTT
  361  TGTGGTTTGG TAACCAGTGG CTTCCCCGAA AGTCCACTAC TGTTCTTGGG CTTCTTGGAC
  421  CACAAACCCA CTCAAGTAAC CCAAACACTC AAACACTACC AAAACTTCCA AGGCACCATT
  481  GTTTTATTTG AAGCGGTACA CCGTTTACAA CAAACACTGG AAGTAATCCA AACGGTGTTT
  541  AGTAATACTG AAGTTTTTGT AGGGCGGGAA CTGACCAAGC TCCACGAAAG CCACTACTGG
  601  TTTAATACAA GTGCACCGCT GCCAGACATT ACTCTAAAGG GCGAGTTTGT GATTGTGATT
  661  AACAACCACC ACACCCAACC GGTGGGGCAA TATTCCGACC AACTCTTAAA ACAAGAAATT
  721  ACCCAATTAG TCCAAATGGG CGTTAAGGTT AAGGATGCTT GTCATTATTT AGCTAAACGA
  781  TTGCAATTAA AATCAAATAA GCTCTACACC TTATTCCATG AAAGTGATTA A
Download Sequence
Operon 
OP564
Operon location 
85760 - 86485
Protein (mpn071)
Name 
Predicted methyltransferase YabC
Stable ID 
Mpn071
Molecular Weight 
30360
Isoelectric Point 
7
Localization 
Cytoplasm
Comment Homology with B. subtilis yabC, E. coli yraL. SAM-dependent methyltransferase
Sequence 
MPALKVIATPIGNIEEVSPRVKAALTKCEVLFCEDTRVTKKLLGLLGIDFSNKQFIINNEFKEKQNLSKVANLIHQYHCG
LVSDAGYPSVSDPGHILVEYVRTQLPQIAIEVINGPSALVCGLVTSGFPESPLLFLGFLDHKPTQVTQTLKHYQNFQGTI
VLFEAVHRLQQTLEVIQTVFSNTEVFVGRELTKLHESHYWFNTSAPLPDITLKGEFVIVINNHHTQPVGQYSDQLLKQEI
TQLVQMGVKVKDACHYLAKRLQLKSNKLYTLFHESD
Post translational modifications
No post translational modifications were found
GENE/PROTEIN yabC (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-221 SSF53790 (IPR000878) Tetrapyrrole methylase Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008168'>'methyltransferase' == '' ? '': 'methyltransferase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0008168)

0
3-274 TIGR00096 (IPR008189) Uncharacterised protein family UPF0011 0
4-115 G3DSA:3.40.1010.10 (IPR014777) Tetrapyrrole methylase, subdomain 1 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008168'>'methyltransferase' == '' ? '': 'methyltransferase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0008168)

0.0000003
4-200 PF00590 (IPR000878) Tetrapyrrole methylase Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008168'>'methyltransferase' == '' ? '': 'methyltransferase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0008168)

9.1e-22
48-246 PTHR21091:SF18 (n.a.) NULL 1.7e-28
48-246 PTHR21091 (n.a.) NULL 1.7e-28
83-94 PS01296 (IPR018063) Uncharacterised protein family UPF0011, conserved 0
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
4 235 231 - b3146 Escherichia coli 14 247 5e-23 29.7521 252
4 219 215 - MARTH_orf163 Mycoplasma arthritidis 5 218 1e-31 36.9369 320
1 233 232 - MAG6830 Mycoplasma agalactiae 1 234 3e-27 30.7054 282
4 220 216 - MCJ_003790 Mycoplasma conjunctivae 5 218 3e-28 32.3009 291
2 269 267 - MCAP_0410 Mycoplasma capricolum subsp. capricolum 12 287 8e-33 30.8772 331
1 271 270 - MYCGA5270 Mycoplasma gallisepticum 1 269 <1e-50 37.8676 502
1 275 274 - MG056 Mycoplasma genitalium 1 276 <1e-50 62.3188 923
4 220 216 - MHP7448_0261 Mycoplasma hyopneumoniae 7448 5 219 9e-35 37.7778 348
6 199 193 - MHO_1000 Mycoplasma hominis 7 195 6e-25 32.6531 262
6 218 212 - MMOB5250 Mycoplasma mobile 7 219 4e-26 35 272
2 272 270 - MSC_0564 Mycoplasma mycoides subsp. mycoides SC 12 289 1e-33 31.5972 339
4 274 270 - MYPE1400 Mycoplasma penetrans 5 277 <1e-50 40.2135 478
2 269 267 - Caulobacter crescentus NA1000 17 280 6e-22 30.1418 242
3 274 271 - Lactococcus lactis subsp. lactis KF147 19 290 1e-26 29.4326 281
4 226 222 - LIC_11072 Leptospira interrogans serovar Copenhage 17 237 2e-34 38.4956 351
4 228 224 - LIC_11151 Leptospira interrogans serovar Copenhage 9 235 3e-17 29.9145 202
1 220 219 - MS53_0050 Mycoplasma synoviae 1 219 3e-29 37.7193 299
8 275 267 - Rv1003 Mycobacterium tuberculosis 10 275 4e-24 29.7101 261
1 273 272 - Bacillus subtilis subsp. subtilis 1 276 6e-25 28.8194 270
1 273 272 - Bacillus subtilis subsp. subtilis 14 289 5e-24 28.125 262
1 219 218 - Mycoplasma pulmonis 1 216 1e-27 34.8214 286
External IDs
COG 
COG0313R
Gene ID 
877160
GI 
13507810
GO 
General function prediction only
Home COG 
R
InterPro 
IPR000878|Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
InterPro 
IPR008189|Protein of unknown function UPF0011
Old MP number 
MP084
Pathway 
Metabolism
Pathway 
DNA, RNA?
PDB homologs 
1pjs_A
PDB homologs 
1pjq_A
PDB homologs 
1pjt_A
Pfam 
PF00472
PID 
g1673738
RefSeq 
NP_109759.1
Swiss-Prot protein ID 
Y071_MYCPN
phylomeDB tree 
Y071_MYCPN
UniProt 
P75046
Transcription
IMAGE BROWSERS

OPERON OP564 (Genomic Overview)
Region:85760-86485

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STRING image

STRING of Mpn071STRING legend

PDB image(s)

1pjs

PDB 1pjs

1pjq

PDB 1pjq

1pjt

PDB 1pjt
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