MyMpn Project

Gene rpsU (MPN296)

Name	rpsU
Stable ID	MPN296
Location	351728 - 351910 +
Sequence	1 ATGCCAAAGA TTGAAGTTAA AAACGATGAT TTAGAGTTAG CTTTAAAAAA GTTTAAACGG 61 GTTTCGCTAG AAATTCGCCG TTTAGCACAG CGTCACGAAT ACCACCTTCG AAAAGGAATG 121 CGCTTGCGTG AAAAGCGAAA GATTGCGCAG AAGAAACGCC GTAAGTTTCG TAATATGGTC 181 TAG
Download Sequence
Operon	OP119
Operon location	348825 - 355675

Protein (mpn296)

Name	30S ribosomal protein S21
Stable ID	Mpn296
Molecular Weight	6600
Isoelectric Point	12
Localization	Cytoplasm
Comment	-
Sequence	MPKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV

Post translational modifications

Modification	Modified sequence	Relative start	Relative end	Amino acid
Methylation	PkIEVkNDDLELALkK	2	18	K
Methylation	PkIEVkNDDLELALKk	2	18	K

GENE/PROTEIN rpsU (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
2-56	TIGR00030 (IPR001911)	Ribosomal protein S21	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412) Cellular Component: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)		0.0000000000023

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	60	59	- MG210.2	Mycoplasma genitalium	1	60	5e-27	90	272
1	52	51	- MYCGA3150	Mycoplasma gallisepticum	1	52	0.00000000000008	65.3846	160
1	56	55	- MYPE9180	Mycoplasma penetrans	1	56	0.0000000004	53.5714	129

External IDs

Gene ID	877152
GI	13508035
GO	Translation, ribosomal structure and biogenesis
Home COG	J
InterPro	IPR001911\|Ribosomal protein S21
Old MP number	539-540
Pathway	Translation
PID	New identified
RefSeq	NP_109984.1
Swiss-Prot protein ID	RS21_MYCPN
phylomeDB tree	No orthologous found
UniProt	P57079

Transcription

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OPERON OP119 (Genomic Overview)

Region:348825-355675

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