MyMpn Project

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
8-419	SSF52540 (n.a.)	NULL			0
10-648	TIGR00631 (IPR004807)	Excinuclease ABC, B subunit	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006281'>'DNA' == '' ? '': 'DNA'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006281) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006289'>'nucleotide' == '' ? '': 'nucleotide';-'excision' == '' ? '': 'excision'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006289) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0009432'>'SOS' == '' ? '': 'SOS'; 'response' == '' ? '': 'response'; ('GO' == '' ? '': 'GO';:0009432) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0009381'>'excinuclease' == '' ? '': 'excinuclease'; 'ABC' == '' ? '': 'ABC'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0009381)		0
13-92	G3DSA:3.40.50.300 (n.a.)	NULL			1.99993e-41
15-430	SM00487 (IPR014001)	DEAD-like helicase, N-terminal			7.99999e-23
22-135	PF04851 (IPR006935)	Restriction endonuclease, type I, R subunit/Type I	Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016787'>'hydrolase' == '' ? '': 'hydrolase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0016787)		0.0000062
29-172	PS51192 (IPR014021)	Helicase, superfamily 1/2, ATP-binding domain			0
34-593	SSF52540 (n.a.)	NULL			7.09998e-36
287-364	G3DSA:3.40.50.300 (n.a.)	NULL			1.99993e-41
424-591	G3DSA:3.40.50.300 (n.a.)	NULL			8.09951e-42
435-597	PS51194 (IPR001650)	Helicase, C-terminal	Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)		0
464-550	SM00490 (IPR001650)	Helicase, C-terminal	Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)		1.1e-21
469-549	PF00271 (IPR001650)	Helicase, C-terminal	Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)		0.0000000000000031
556-598	PF12344 (n.a.)	NULL			0.00000000000023
600-655	SSF46600 (IPR009055)	UvrB, C-terminal UvrC-binding	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006289'>'nucleotide' == '' ? '': 'nucleotide';-'excision' == '' ? '': 'excision'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006289) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004518'>'nuclease' == '' ? '': 'nuclease'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004518)		0.0000000033
603-652	G3DSA:4.10.860.10 (n.a.)	NULL			0.0000000000045
615-650	PS50151 (IPR001943)	UvrB/UvrC protein	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006289'>'nucleotide' == '' ? '': 'nucleotide';-'excision' == '' ? '': 'excision'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006289) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004518'>'nuclease' == '' ? '': 'nuclease'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004518)		0
617-650	PF02151 (IPR001943)	UvrB/UvrC protein	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006289'>'nucleotide' == '' ? '': 'nucleotide';-'excision' == '' ? '': 'excision'; 'repair' == '' ? '': 'repair'; ('GO' == '' ? '': 'GO';:0006289) Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004518'>'nuclease' == '' ? '': 'nuclease'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004518)		0.00000025

Name	uvrB
Stable ID	MPN211
Location	259641 - 261614 +
Sequence	1 ATGAAAAGTC CAACGAAGGA CAGTAAACTG TTCCACCTCA AGAGTAACTT TGCCCCCACT 61 GGGGACCAAC CAGCGGCGAT TGCTAAGTTA GCTGAGTTTC AAACCAATGA ACAGGTCTTA 121 CTCGGTGCTA CGGGTACCGG TAAGACCTTT ACGATTGCCA ACGTTATTCA AAAGGTACAA 181 CTGCCTACAG TAGTGATTGC CCACAATAAA ACGTTAGCGG GACAGCTTTA TCAGGAGTTG 241 AAGGAGTTAT TCCCTAATAA TGCGGTGGAG TACTTCATCT CCTACTTTGA CTTTTACCAA 301 CCAGAGGCTT ATCTGCCCGC TAAGGGGGTT TACATTGAAA AGAGTGCAAC TGTTAACGAA 361 GAGATTAAAC GGTTACGAGT GTCCACCTTA CATTCACTCT CTACCCGCAA GGATGTGATT 421 GTGGTGGGTT CGGTAGCCAG TATTTACCCA ACTTCTTCTC CCGCTGATTT CGCCCAGTAC 481 TCGCTCTGGT TAGTAGTTGG TAAGGAATAC GGTTTAAGTG AGTTAAAAAC GCAGTTAATT 541 CACCTAAACT ATGTTGTTAA TAAACAACAG TTAACTCCGG GAAAGTTCCG CTTTCAGGGC 601 GATGTTGTTG AAGTGTTTCC TGGTTATGCG CAGGATTATG TCTTGCGGCT TTCCTTCTTT 661 GACCAGCAAC TAGAACAAAT TGCTCGCATC GATCCCTTAA CTAACAAGGT ATTGGAAACC 721 CTTAACAGCT TTAAGTTAGG TCCCGCTGAT GAGTACATAG TAAACCAAAA TGACTTAGGA 781 GTAGCCTTAG ACACGATTAA GGCCGAACTC AAAGATCGCT TAAAGTACTT TGAACGGTTA 841 AACTTCCCCG AACGTGCCCA GCGCTTACAA ACGATTACCG AACACGATTT AGCAGATCTG 901 AAGGCCTGGG GGGTATGTAG TGGCGTGGAA AACTATGCGC GGCATTTAGA ACACCGCCCA 961 CCGCACTCCA AGCCGTATAA CATCTTTGAT TACTTTACTA AAGGTGAATG GCTATTGGTA 1021 GTTGATGAAT CCCACCAAAC GCTACCGCAA ATTAAGGGGA TGTACAACAC CGATATTTCA 1081 CGGAAACAAA GCCTAATTGA GTACGGTTTT CGCCTCCCTT CAGCTTTAGA CAACCGTCCT 1141 TTATCCTATG AGGAATTCCG CCAGGGAATC AACAAGGTCA TTTATGTATC CGCTACCCCT 1201 AGGGAAGAGG AAATTCAGTT AAGTCACAAC AACGTGGTCG AACAGTTAGT GCGTCCCACC 1261 TACCTCTTGG ACCCGGAAGT GATTGTGAAA CCGAAGGACA ACCAGGTTGA AGACCTAGTG 1321 AGTGAAATCA TTAACCAAAG AAAACACAAC GGTCGTACCT TTGTCACGGT GTTAACGATT 1381 AAGATGGCGG AAAACCTGAC TGACTTTTTG AAGGAGCGCA ACATTAAGGT AGCGTACATC 1441 CACAAGGATA TTAAAGCCTT GGAACGTTTA ATTCTGTTAA CGGATTTACG CAAAGGTGAG 1501 TATGAGTGTT TAGTGGGGAT TAACTTACTG CGAGAAGGTT TAGATGTTCC TGAAGTTTCA 1561 CTCGTAGCCA TCTTTGACGC TGACATTCCT GGATTACCAC GCGATGAGCG CAGTTTAATC 1621 CAGATAATTG GCCGCGCTGC GCGAAACGTT CATGGCCGGG TGATTATGTA TGCCAATACC 1681 ATTAGCGAAC AAATGGATAA GGCGATTAAG GAAACGCAAC GCCGGCGCAC CATCCAAATG 1741 GCTTACAACG AACAACACCA CAAAACACCA ATGACGGTGC AAAAACCAAT TACCTTAAAC 1801 CAGCCGATTA AGTTAAAGAC CAAAAGCTCA GAGCAGCAAA AAGCTGCTTT AATTAAGCAG 1861 CTAACCAAGG AAATGAAGCA AGCAGCAGCT AACCAAAACT ATGAGTTAGC GATTGAGATC 1921 CGCGACTCGA TCTTTGAATT GGAAAAGCAA TTTCGTGGTA AAATTAAGAG CTAG
Download Sequence
Operon	OP90
Operon location	257205 - 261600

Name	UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B)
Stable ID	Mpn211
Molecular Weight	72270
Isoelectric Point	9
Localization	Cytoplasm
Comment	Nucleotide excision repair. Helicase, DNA binding and ATPase activity. Recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts).
Sequence	MKSPTKDSKLFHLKSNFAPTGDQPAAIAKLAEFQTNEQVLLGATGTGKTFTIANVIQKVQLPTVVIAHNKTLAGQLYQEL KELFPNNAVEYFISYFDFYQPEAYLPAKGVYIEKSATVNEEIKRLRVSTLHSLSTRKDVIVVGSVASIYPTSSPADFAQY SLWLVVGKEYGLSELKTQLIHLNYVVNKQQLTPGKFRFQGDVVEVFPGYAQDYVLRLSFFDQQLEQIARIDPLTNKVLET LNSFKLGPADEYIVNQNDLGVALDTIKAELKDRLKYFERLNFPERAQRLQTITEHDLADLKAWGVCSGVENYARHLEHRP PHSKPYNIFDYFTKGEWLLVVDESHQTLPQIKGMYNTDISRKQSLIEYGFRLPSALDNRPLSYEEFRQGINKVIYVSATP REEEIQLSHNNVVEQLVRPTYLLDPEVIVKPKDNQVEDLVSEIINQRKHNGRTFVTVLTIKMAENLTDFLKERNIKVAYI HKDIKALERLILLTDLRKGEYECLVGINLLREGLDVPEVSLVAIFDADIPGLPRDERSLIQIIGRAARNVHGRVIMYANT ISEQMDKAIKETQRRRTIQMAYNEQHHKTPMTVQKPITLNQPIKLKTKSSEQQKAALIKQLTKEMKQAAANQNYELAIEI RDSIFELEKQFRGKIKS

Modification	Modified sequence	Relative start	Relative end	Amino acid
Oxidation	GmYNTDISR	353	362	M
Oxidation	mAENLTDFLK	462	472	M
Oxidation	mAENLTDFLKER	462	474	M
Oxidation	VIMYANTISEQmDK	554	568	M
Oxidation	VImYANTISEQMDK	554	568	M
Oxidation	VImYANTISEQmDK	554	568	M
Oxidation	TPmTVQKPITLNQPIK	589	605	M

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
8	651	643	- b0779	Escherichia coli	2	669	<1e-50	47.3134	1467
34	272	238	- b1114	Escherichia coli	12	233	0.0000000002	22.1311	148
11	647	636	- MARTH_orf076	Mycoplasma arthritidis	5	654	<1e-50	45.6355	1475
11	647	636	- MAG3780	Mycoplasma agalactiae	4	658	<1e-50	44.2922	1438
10	650	640	- MCJ_000340	Mycoplasma conjunctivae	1	653	<1e-50	43.9695	1445
11	650	639	- MCAP_0773	Mycoplasma capricolum subsp. capricolum	8	661	<1e-50	47.432	1571
9	650	641	- MYCGA0380	Mycoplasma gallisepticum	4	657	<1e-50	54.8092	1858
1	656	655	- MG073	Mycoplasma genitalium	1	655	<1e-50	76.9817	2752
6	648	642	- MHP7448_0648	Mycoplasma hyopneumoniae 7448	5	658	<1e-50	43.5115	1437
11	651	640	- MHO_4730	Mycoplasma hominis	4	654	<1e-50	45.5658	1461
7	648	641	- MMOB5720	Mycoplasma mobile	2	657	<1e-50	44.5967	1433
11	650	639	- MSC_0944	Mycoplasma mycoides subsp. mycoides SC	14	667	<1e-50	47.432	1569
5	648	643	- MYPE8890	Mycoplasma penetrans	3	658	<1e-50	50.9119	1705
33	259	226	-	Lactococcus lactis subsp. lactis KF147	20	235	8e-17	29.386	200
8	650	642	- LIC_12941	Leptospira interrogans serovar Copenhage	2	660	<1e-50	44.4109	1472
1	256	255	- LIC_11455	Leptospira interrogans serovar Copenhage	29	272	0.000000000000002	26.3566	190
397	559	162	- LIC_10738	Leptospira interrogans serovar Copenhage	183	347	0.000008	24.5614	107
9	656	647	- MS53_0058	Mycoplasma synoviae	2	668	<1e-50	42.1525	1361
11	653	642	- Rv1633	Mycobacterium tuberculosis	7	691	<1e-50	44.3314	1445
410	548	138	- MT3307	Mycobacterium tuberculosis	242	363	0.00000003	28.777	128
11	647	636	-	Lactococcus lactis subsp. lactis KF147	11	688	<1e-50	45.8824	1536
5	644	639	-	Caulobacter crescentus NA1000	41	702	<1e-50	44.7289	1399
384	564	180	-	Caulobacter crescentus NA1000	749	926	0.0000001	23.6559	123
40	259	219	-	Caulobacter crescentus NA1000	17	227	0.000003	24.0909	123
11	650	639	-	Bacillus subtilis subsp. subtilis	5	660	<1e-50	47.7204	1595
11	650	639	-	Bacillus subtilis subsp. subtilis	5	660	<1e-50	47.7204	1594
37	343	306	-	Bacillus subtilis subsp. subtilis	27	311	1e-17	23.3766	212
474	576	102	-	Bacillus subtilis subsp. subtilis	858	952	0.000009	30.0971	212
459	580	121	-	Bacillus subtilis subsp. subtilis	236	353	0.0000004	27.6423	121
459	580	121	-	Bacillus subtilis subsp. subtilis	250	367	0.0000004	27.6423	121
11	647	636	-	Mycoplasma pulmonis	5	654	<1e-50	45.6355	1475
10	647	637	-	Mycoplasma pulmonis	1	653	<1e-50	44.9695	1471

COG	COG0556L
Gene ID	877052
GI	13507950
GO	DNA replication, recombination and repair
Home COG	L
InterPro	IPR006935\|Type III restriction enzyme, res subunit
InterPro	IPR009055\|UvrB, C-terminal UvrC-binding
InterPro	IPR004807\|Excinuclease ABC, B subunit
InterPro	IPR001650\|Helicase, C-terminal
InterPro	IPR014001\|DEAD-like helicases, N-terminal
InterPro	IPR014021\|Helicase superfamily 1 and 2 ATP-binding
InterPro	IPR001943\|UvrB/UvrC protein
Old MP number	MP620
Pathway	Division, DNA maintenance
Pathway	DNA replication, recombination and repair
PDB homologs	1d9z_A
PDB homologs	1d9x_A
PDB homologs	1d2m_A
PDB homologs	1A1V
Pfam	PF02151
Pfam	PF04851
Pfam	PF00270
Pfam	PF06523
Pfam	PF02888
Pfam	PF00271
PID	g1674323
RefSeq	NP_109899.1
Swiss-Prot protein ID	UVRB_MYCPN
phylomeDB tree	UVRB_MYCPN
UniProt	P75558