MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene pepF (MPN197)
Name 
pepF
Stable ID 
MPN197
Location 
236529 - 238364 +
Sequence 
    1  ATGAATAACC AATACAACTG AAACCTCGAA GTTTTACTAA ATGGTAAGAG TTTAGCTGAT
   61  AACTTTACCG AACTCAAACA ACTCAGTGAG CAGGAAAAAG CACTTTACGA TGGTGGTGCT
  121  TGCTTTCAAA CCAAAGCTAA GTTCACCGAA TTTTTACAAC TACAAGAAAA GATTGAGGTC
  181  TTAGAAAACC GTTACAGCAA TTTTTTGAGT AACAAGCACG CTGAAAACAG TTTGGACAAA
  241  ACGATTAACG ACGCTTTATT TCAGTACGAA ATGTTTAAAA GTGAACATGC CTTGGTGTTT
  301  GTTGACTTTG AAAAGAACCT GTTTAAGCAC GAAAAGGTGA TTCGCGCATA CCTCCAAGAC
  361  CCTGCTTTAA AACAATACCA AAGGGATTTT GAACTAGTAT GACGGAACAA GAAACACCAA
  421  ATTGATCCCG CTAGTCAAAA GTTGTTAGCG CAAATTAGTC CGGCATGAAA CCAAGCGGAC
  481  AAGATCTTTA ATGTGTTATC TACCGCTGAC CTAAACCTCC AACCAGTCGT ATACAAGGGT
  541  AAAACTTACG TTATTAACGC GGTTAGTGAT TATCAAAGTC TCTTGGAAAA TAAGGATCGT
  601  GGCCTGCGTG AAGCTGCTTA CAAAGTGTGG TTGGAAATTT ACTGACCCAC ACGCAATACC
  661  TTGAGTGTGA GTTTAGTGGA AAACTACATC CAATTAGAAA CCTTTGCTAA GTTAAAGAAA
  721  CACCCCAATT ACATTGCCAA AACAGCTTTT GATGATGAAA TTGATGTGGC TTTCATTGAC
  781  TTTGTTTATG AGCAAGTGGC TAGCTTTGCC CCGACCTTTA AAGCCTTTCA AAGTTTAAGG
  841  AAGCAAATTT ACAAGCACGT TTTAAAACTA GACAAAGCCC AACCCTGGGA CTTGTCGGTA
  901  CCGTTGTTTA AGGCTAGTGG TGACTACACC ATTGAACAAG CCCAAACTGA TGCGCTTAAG
  961  ATATTAGCAC CTATGGGTAG TGAATACCTG GAAGTGGTAA AGGAAGCCTT TCGGGAGCGC
 1021  TGAATTTCCT GGTTACCCGA TAAGAACAAG TATACCGGGG CTTACTCAAT TTCCAACGTT
 1081  AAGGGTTTAG ATCATTACTT CATTTTGATG AATTTTGATA AAACCCGCGC TTCATTAAAT
 1141  ACCCTAGTCC ATGAATTGGG TCACAGTGTC CATTCTTGGT ATGCATCTAA GTACCAAACG
 1201  CAAAACTTGG ATCCTACAAT TTTCTATGCT GAAATTGCTT CCATTTGTAA CGAATTACTG
 1261  TTGTGTTACC ACGACATTAT TAACTATGAA AACCGCAATC CGCAGCAGTT AATCCGTAGT
 1321  TTAATGGAAC AAATTAGCCA CTTCTTTGGC GCTACCACGA GACAGTTAAT GTTCTCTCAG
 1381  TTTGAACAAG ACACCTTAAA GTTAATTCAG CAAAACCAAA AGCCTGACTT TAAGACCCTA
 1441  GTGGAAATTT ATGGTAAGAC CGCCATTAAG TACCAAGCTG CTAATGCTGA CGCTATTACG
 1501  AAAAAGCTCA AGCAAACCAA GTACCAAAAG TCATTGGCTT ACATTACCTC CATTCCGCAT
 1561  TTTTACGCTG GTAACTTCTA TGTTTACAAG TACGCCATTG GTCAAGTTGT GGGTACCTTA
 1621  GTTGGTAAAA AACTGAGTGC TGGTGACAGT AATATGCTCG CTGCTTACAA GCGCTTCTTG
 1681  TCTTCAGGCT CCACCTTACC ACCACTAGAA ACAATTAAAT TGTTAGGGAT TGACCTTACC
 1741  CAACCAGAAC CGTGACAAGA AGCCCATGCG GAGTTAAAGC GCTGGATTAA ACTAGTACAA
 1801  ACAGCCTTTA AACAGCTGCA ACACAAAAAG CGCTAG
Download Sequence
Operon 
OP80
Operon location 
230585 - 239373
Protein (mpn197)
Name 
Oligoendopeptidase F homolog (EC 3.4.24.-)
Stable ID 
Mpn197
Molecular Weight 
67210
Isoelectric Point 
9
Localization 
Cytoplasm
Comment -
Sequence 
MNNQYNWNLEVLLNGKSLADNFTELKQLSEQEKALYDGGACFQTKAKFTEFLQLQEKIEVLENRYSNFLSNKHAENSLDK
TINDALFQYEMFKSEHALVFVDFEKNLFKHEKVIRAYLQDPALKQYQRDFELVWRNKKHQIDPASQKLLAQISPAWNQAD
KIFNVLSTADLNLQPVVYKGKTYVINAVSDYQSLLENKDRGLREAAYKVWLEIYWPTRNTLSVSLVENYIQLETFAKLKK
HPNYIAKTAFDDEIDVAFIDFVYEQVASFAPTFKAFQSLRKQIYKHVLKLDKAQPWDLSVPLFKASGDYTIEQAQTDALK
ILAPMGSEYLEVVKEAFRERWISWLPDKNKYTGAYSISNVKGLDHYFILMNFDKTRASLNTLVHELGHSVHSWYASKYQT
QNLDPTIFYAEIASICNELLLCYHDIINYENRNPQQLIRSLMEQISHFFGATTRQLMFSQFEQDTLKLIQQNQKPDFKTL
VEIYGKTAIKYQAANADAITKKLKQTKYQKSLAYITSIPHFYAGNFYVYKYAIGQVVGTLVGKKLSAGDSNMLAAYKRFL
SSGSTLPPLETIKLLGIDLTQPEPWQEAHAELKRWIKLVQTAFKQLQHKKR
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation mNNQYNWNLEVLLNGK 1 17 M
Oxidation TINDALFQYEmFk 81 94 M
Oxidation TINDALFQYEmFK 81 94 M
Oxidation ASGDYTIEQAQTDALKILAPmGSEYLEVVK 305 335 M
Oxidation ILAPmGSEYLEVVK 321 335 M
Oxidation ILAPmGSEYLEVVk 321 335 M
Oxidation ILAPmGSEYLEVVKEAFR 321 339 M
Oxidation GLDHYFILmNFDK 362 375 M
Oxidation GLDHYFILmNFDKTR 362 377 M
Oxidation SLmEQISHFFGATTR 440 455 M
Oxidation QLmFSQFEQDTLK 455 468 M
Oxidation KLSAGDSNmLAAYK 544 558 M
Oxidation KLSAGDSNmLAAYKR 544 559 M
Oxidation LSAGDSNmLAAYK 545 558 M
Oxidation LSAGDSNmLAAYk 545 558 M
Oxidation LSAGDSNmLAAYKR 545 559 M
GENE/PROTEIN pepF (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-602 TIGR00181 (IPR004438) Peptidase M3B, oligoendopeptidase F Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006508'>'proteolysis' == '' ? '': 'proteolysis'; ('GO' == '' ? '': 'GO';:0006508)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004222'>'metalloendopeptidase' == '' ? '': 'metalloendopeptidase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004222)

0
4-597 SSF55486 (n.a.) NULL 0
110-172 PF08439 (IPR013647) Peptidase M3B, oligopeptidase F, N-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008237'>'metallopeptidase' == '' ? '': 'metallopeptidase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0008237) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008270'>'zinc' == '' ? '': 'zinc'; 'ion' == '' ? '': 'ion'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0008270)

0.0000000000093
194-590 PF01432 (IPR001567) Peptidase M3A/M3B, thimet/oligopeptidase F Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006508'>'proteolysis' == '' ? '': 'proteolysis'; ('GO' == '' ? '': 'GO';:0006508)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004222'>'metalloendopeptidase' == '' ? '': 'metalloendopeptidase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004222)

0
341-418 G3DSA:3.40.390.10 (n.a.) NULL 0.00000057
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
1 604 603 - MARTH_orf611 Mycoplasma arthritidis 12 609 <1e-50 30.3426 611
1 610 609 - MAG1240 Mycoplasma agalactiae 10 612 <1e-50 29.582 628
4 596 592 - MCJ_004450 Mycoplasma conjunctivae 17 621 <1e-50 28.0899 554
4 605 601 - MCAP_0193 Mycoplasma capricolum subsp. capricolum 9 597 3e-30 24.7136 312
1 607 606 - MG183 Mycoplasma genitalium 1 606 <1e-50 64.0857 2140
4 604 600 - MHP7448_0521 Mycoplasma hyopneumoniae 7448 12 604 <1e-50 28.4539 523
4 604 600 - MHO_3670 Mycoplasma hominis 14 607 <1e-50 29.5752 585
4 596 592 - MMOB1990 Mycoplasma mobile 15 597 <1e-50 31.2187 699
4 585 581 - MSC_0237 Mycoplasma mycoides subsp. mycoides SC 9 577 2e-31 25.0423 323
1 597 596 - MYPE2820 Mycoplasma penetrans 1 597 <1e-50 34.7754 946
123 579 456 - Lactococcus lactis subsp. lactis KF147 135 574 4.99983e-42 29.0393 417
4 605 601 - MS53_0350 Mycoplasma synoviae 15 611 <1e-50 31.7073 626
252 596 344 - Caulobacter crescentus NA1000 261 589 1e-19 25.2125 226
50 588 538 - Bacillus subtilis subsp. subtilis 125 649 6.02558e-44 28.6765 438
50 588 538 - Bacillus subtilis subsp. subtilis 125 649 6.02558e-44 28.6765 438
7 432 425 - Bacillus subtilis subsp. subtilis 24 450 0.00000000002 20.5298 158
7 422 415 - Bacillus subtilis subsp. subtilis 10 426 0.00000000004 20.5418 155
4 596 592 - Mycoplasma pulmonis 17 601 <1e-50 31.4381 685
External IDs
COG 
COG1164E
EC number 
3.4.24.-
Gene ID 
876899
GI 
13507936
GO 
Amino acid transport and metabolism
Home COG 
E
InterPro 
IPR004438|Peptidase M3B, oligoendopeptidase F
InterPro 
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding site
InterPro 
IPR013647|Oligopeptidase F
InterPro 
IPR001567|Peptidase M3A and M3B, thimet/oligopeptidase F
Old MP number 
MP634
Pathway 
Protein degradation
PDB homologs 
1o86_A
PDB homologs 
1o8a_A
PDB homologs 
1i1i_P
Pfam 
PF08439
Pfam 
PF01432
PID 
g1674339
RefSeq 
NP_109885.1
Swiss-Prot protein ID 
PEPF_MYCPN
phylomeDB tree 
PEPF_MYCPN
UniProt 
P54125
Transcription
IMAGE BROWSERS

OPERON OP80 (Genomic Overview)
Region:230585-239373

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STRING image

STRING of Mpn197STRING legend

PDB image(s)

1o86

PDB 1o86

1o8a

PDB 1o8a

1i1i

PDB 1i1i
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