MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rpsH (MPN179)
Name 
rpsH
Stable ID 
MPN179
Location 
225061 - 225489 +
Sequence 
    1  ATGATAACAA CTACAAAACC AATTAAAGCC CACTTTGATC CAGTGGCTGA CTTACTAACG
   61  AAGATTAACA ATGCGCGCAA AGCGAAGTTA ATGACGGTAA CCACAATTGC TTCCAAGCTC
  121  AAGATTGCCA TCTTGGAAAT TTTGGTCAAG GAAGGTTATT TAGCTAACTT CCAGGTCTTG
  181  GAAAACAAGA GCAAGACCAA GCGGATTGTC ACCTTTAACT TAAAATACAC GCAGCGCCGG
  241  ATTCCCTCCA TTAACGGGGT GAAACAAATT TCCAAGCCGG GTCTGCGGAT CTACCGGCCC
  301  TTTGAAAAGC TCCCGTTAGT TTTAAACGGT CTTGGGATTG CCATTATTTC CACTAGTGAT
  361  GGCGTGATGA CTGATAAGGT AGCGCGCTTA AAGAAAATTG GAGGGGAGAT TCTCGCTTAC
  421  GTTTGGTAA
Download Sequence
Operon 
OP78
Operon location 
217550 - 229680
Protein (mpn179)
Name 
30S ribosomal protein S8
Stable ID 
Mpn179
Molecular Weight 
15620
Isoelectric Point 
11
Localization 
Cytoplasm
Comment -
Sequence 
MITTTKPIKAHFDPVADLLTKINNARKAKLMTVTTIASKLKIAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRR
IPSINGVKQISKPGLRIYRPFEKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAYVW
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation mITTTKPIk 1 10 M
Oxidation mITTTkPIk 1 10 M
Oxidation mITTTKPIK 1 10 M
Oxidation mITTTKPIKAHFDPVADLLTKINNAR 1 27 M
Oxidation LmTVTTIASK 30 40 M
Oxidation LmTVTTIASKLKIAILEILVK 30 51 M
Oxidation LmTVTTIASKLKIAILEILVKEGYLANFQVLENK 30 64 M
Oxidation IYRPFEKLPLVLNGLGIAIISTSDGVmTDK 97 127 M
Oxidation IYRPFEKLPLVLNGLGIAIISTSDGVmTDKVAR 97 130 M
Oxidation LPLVLNGLGIAIISTSDGVmTDKVAR 104 130 M
GENE/PROTEIN rpsH (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
10-142 PTHR11758 (IPR000630) Ribosomal protein S8 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

1.4013e-45
12-142 SSF56047 (IPR000630) Ribosomal protein S8 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

9.90017e-42
13-80 G3DSA:3.30.1370.30 (n.a.) NULL 2.3e-19
13-142 PF00410 (IPR000630) Ribosomal protein S8 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

6.6e-40
86-142 G3DSA:3.30.1490.10 (n.a.) NULL 1e-23
112-129 PS00053 (IPR000630) Ribosomal protein S8 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

0
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
13 141 128 - b3306 Escherichia coli 5 129 4e-28 45.7364 292
13 142 129 - MARTH_orf428 Mycoplasma arthritidis 6 137 3e-31 46.2121 313
13 142 129 - MAG5330 Mycoplasma agalactiae 5 131 3e-25 46.5649 262
13 142 129 - MCJ_001440 Mycoplasma conjunctivae 6 131 7e-28 44.6154 284
13 142 129 - MCAP_0682 Mycoplasma capricolum subsp. capricolum 4 129 8e-30 47.6923 301
11 142 131 - MYCGA0650 Mycoplasma gallisepticum 2 133 <1e-50 64.3939 463
9 142 133 - MG165 Mycoplasma genitalium 8 141 <1e-50 91.0448 636
13 142 129 - MHP7448_0180 Mycoplasma hyopneumoniae 7448 6 131 7e-30 48.4615 302
13 142 129 - MHO_2840 Mycoplasma hominis 6 137 6e-29 44.697 293
13 142 129 - MMOB2490 Mycoplasma mobile 7 133 7e-29 50.7692 293
13 142 129 - MSC_0731 Mycoplasma mycoides subsp. mycoides SC 4 129 3e-30 48.4615 306
11 142 131 - MYPE10030 Mycoplasma penetrans 2 131 1e-32 53.7879 327
13 142 129 - Caulobacter crescentus NA1000 5 132 9e-22 38.4615 237
13 142 129 - Lactococcus lactis subsp. lactis KF147 5 132 2e-28 47.6923 292
13 138 125 - LIC_12859 Leptospira interrogans serovar Copenhage 5 129 2e-17 35.7143 200
13 142 129 - MS53_0629 Mycoplasma synoviae 5 132 4e-27 43.8462 277
13 142 129 - Rv0718 Mycobacterium tuberculosis 5 132 1e-28 46.1538 296
13 142 129 - Bacillus subtilis subsp. subtilis 5 132 5e-31 51.5385 319
37 142 105 - Bacillus subtilis subsp. subtilis 11 114 1e-25 54.717 273
13 142 129 - Mycoplasma pulmonis 6 132 1e-27 46.1538 283
External IDs
Gene ID 
876779
GI 
13507918
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR000630|Ribosomal protein S8
Old MP number 
MP652
Pathway 
Translation
PDB homologs 
1s03_G
PDB homologs 
1p6g_H
PDB homologs 
1p87_H
PDB homologs 
1AN7-A
Pfam 
PF00410
PID 
g1674357
RefSeq 
NP_109867.1
Swiss-Prot protein ID 
RS8_MYCPN
phylomeDB tree 
RS8_MYCPN
UniProt 
Q50304
Transcription
IMAGE BROWSERS

OPERON OP78 (Genomic Overview)
Region:217550-229680

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STRING image

STRING of Mpn179STRING legend

PDB image(s)

1s03

PDB 1s03

1p6g

PDB 1p6g

1p87

PDB 1p87

1AN7

PDB 1AN7
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