MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rplW (MPN167)
Name 
rplW
Stable ID 
MPN167
Location 
219474 - 220187 +
Sequence 
    1  ATGGATGTAA CGAACGTACT GCTAAAACCA GTTCTAACCG AAAAGGTGTA CTTCAACCAA
   61  ATGGGTGAAA CCAAGAAGTA CGTCTTTGTG GTGAACCCTA AAGCAAGTAA AACACGCGTT
  121  AAACTAGCTT TTGAATTAGT GTATGGCATT AAGCCACTGA AGGTTAACAC CTTAATTAGA
  181  AAACCAACCA CCATTCGCGG TGGGAGCCGT TTTCCTGGTT TGAGCAAACT AGAAAAGTTG
  241  GCTGTGATTA CCTTACCAAA GGGTATTGCC ATTTCAGTTA CTGGTGAAGC GCCAGAAAAA
  301  ACCGATAAGC CAGCGGACAA AACCACCCTT AAGGAAAGTA CTGTTAAGGA GATTAAGGAC
  361  ACCAAAAACA GTCCAGAAGC TGTTGTGAAA ACTGCTGTGG AAGCGTTGCA AATTAAACCA
  421  ACTGCCGCTC CTGTAACCAC CGCCCCTCTA CAAACCGTGG CGGTGAAGGT AGCTAAAGAA
  481  GTTAAAGAAG TTAAGGTAGA AAAGCCGGTT AAAGTGGAAA AACCAACCAA ACCGGCAAAG
  541  GTAGCAAAAG AAGCTAAAAC GACCAAAGTA GCTAAGGAAA CTAAAGCTGA AAAGTCAGTT
  601  CAAACAACCA AAGTAGCTAA GGAAACTAAA ACTGAAAAGT CAGCTAAAAC TACCAAAACT
  661  ACAGCTACAA AAACTACTAA AACTAAAACC ACCAAAAAGG AGGTTAAAAA GTAA
Download Sequence
Operon 
OP78
Operon location 
217550 - 229680
Protein (mpn167)
Name 
50S ribosomal protein L23
Stable ID 
Mpn167
Molecular Weight 
26070
Isoelectric Point 
11
Localization 
Cytoplasm
Comment -
Sequence 
MDVTNVLLKPVLTEKVYFNQMGETKKYVFVVNPKASKTRVKLAFELVYGIKPLKVNTLIRKPTTIRGGSRFPGLSKLEKL
AVITLPKGIAISVTGEAPEKTDKPADKTTLKESTVKEIKDTKNSPEAVVKTAVEALQIKPTAAPVTTAPLQTVAVKVAKE
VKEVKVEKPVKVEKPTKPAKVAKEAKTTKVAKETKAEKSVQTTKVAKETKTEKSAKTTKTTATKTTKTKTTKKEVKK
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation mDVTNVLLKPVLTEK 1 16 M
Oxidation VYFNQmGETK 16 26 M
Oxidation VYFNQmGETk 16 26 M
Oxidation VYFNQmGETKK 16 27 M
Oxidation VYFNQmGETKKYVFVVNPK 16 35 M
GENE/PROTEIN rplW (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-96 SSF54189 (IPR012678) Ribosomal protein L23/L15e Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

4.90001e-19
4-92 PF00276 (IPR013025) Ribosomal protein L25/L23 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

3.1e-20
5-94 G3DSA:3.30.70.330 (IPR012677) Nucleotide-binding, alpha-beta plait Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0000166'>'nucleotide' == '' ? '': 'nucleotide'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0000166)

3.8e-16
28-60 PTHR11620 (n.a.) NULL 0.000025
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
1 103 102 - MAG5440 Mycoplasma agalactiae 1 100 0.0000000005 36.1905 133
1 91 90 - MARTH_orf441 Mycoplasma arthritidis 1 89 0.0000009 31.8681 105
1 99 98 - MCJ_001330 Mycoplasma conjunctivae 1 97 0.00000006 30 115
1 119 118 - MHO_2960 Mycoplasma hominis 1 116 0.000000006 36.0656 123
1 99 98 - Lactococcus lactis subsp. lactis KF147 1 97 0.0000002 34 115
2 85 83 - Bacillus subtilis subsp. subtilis 3 83 0.0000004 39.2857 115
2 85 83 - Bacillus subtilis subsp. subtilis 3 83 0.0000004 39.2857 115
1 107 106 - MYCGA0530 Mycoplasma gallisepticum 1 107 9e-28 48.5981 287
1 96 95 - MCAP_0694 Mycoplasma capricolum subsp. capricolum 1 93 0.0000005 34.375 108
1 96 95 - MG153 Mycoplasma genitalium 1 96 1.99993e-41 76.0417 404
2 88 86 - Rv0703 Mycobacterium tuberculosis 6 89 0.000002 33.3333 108
1 111 110 - MS53_0641 Mycoplasma synoviae 1 99 0.0000003 30.0885 109
1 114 113 - MHP7448_0192 Mycoplasma hyopneumoniae 7448 1 109 0.000005 29.5652 99
1 119 118 - MMOB2370 Mycoplasma mobile 1 114 0.00000004 33.6134 116
1 96 95 - MSC_0743 Mycoplasma mycoides subsp. mycoides SC 1 93 0.0000005 34.375 108
1 96 95 - MYPE10160 Mycoplasma penetrans 1 96 1e-21 48.9583 235
1 98 97 - Mycoplasma pulmonis 1 95 0.0000007 32 107
External IDs
COG 
COG0089J
Gene ID 
877178
GI 
13507906
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR012678|Ribosomal L23 and L15e, core
InterPro 
IPR001014|Ribosomal L23 protein
InterPro 
IPR013025|Ribosomal protein L25/L23
InterPro 
IPR012677|Nucleotide-binding, alpha-beta plait
Old MP number 
MP664
Pathway 
Translation
PDB homologs 
1nkw_R
PDB homologs 
1s1i_T
PDB homologs 
1nwx_R
Pfam 
PF00276
PID 
g1674369
RefSeq 
NP_109855.1
Swiss-Prot protein ID 
RL23_MYCPN
phylomeDB tree No orthologous found
UniProt 
P75578
Transcription
IMAGE BROWSERS

OPERON OP78 (Genomic Overview)
Region:217550-229680

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STRING image

STRING of Mpn167STRING legend

PDB image(s)

1nkw

PDB 1nkw

1s1i

PDB 1s1i

1nwx

PDB 1nwx
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