MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rplD (MPN166)
Name 
rplD
Stable ID 
MPN166
Location 
218833 - 219471 +
Sequence 
    1  ATGGCTAAGC TTAAACTAAT TAAAATCGAC GGTTCCTTTG AAACTGAACC AGTGAAACTA
   61  AGCCCTGGTT TAATTGCTAA GGAACTCAAA CAACAACCGG TGTTTGATGC CGTGTTAGTA
  121  GAACAAGCTT CCTGACGCCA AGGCACCCAT TCCATTTTAA CCAAGGGCGA AGTCCGTGGT
  181  GGTGGTAAGA AGCCTTACAA ACAAAAACAC ACCGGGAAAG CGCGTCAAGG TTCAACCCGT
  241  AACCCCCACT TTGTTGGTGG TGGCATTGTG TTTGGTCCCA AGCCCAATCG TAACTACAGC
  301  TTAAAACTCA ACAAGAAAGC GCACACGGCA GCCTTGCACA CTGTTTGGAG TGAAAAGTTA
  361  GCTTCAGACA ACACCCACCT AGTGGACCAA AACCTCTTTA ACAAAACTGA GGGTAAAACC
  421  AAGGTGATGA TGCAATTTTT AAAGAGTGCC AAGCTCTTGG ACAAAAACGT GTTGTTTGTA
  481  GTTAATACCC TTAACACCAA CTTAGAACAA AGCACCAGCA ACATTAAAAA CGTGCAGGTC
  541  AAACACCTAG ACAAGGTTTC TGTAAGGGAT CTGATGTTAG CTAACGCTCT TTTAGTTGAA
  601  AAAGAAGTTT TAAAAGCTTT GGAGGGCAAA TTTAAATAA
Download Sequence
Operon 
OP78
Operon location 
217550 - 229680
Protein (mpn166)
Name 
50S ribosomal protein L4
Stable ID 
Mpn166
Molecular Weight 
23320
Isoelectric Point 
11
Localization 
Cytoplasm
Comment -
Sequence 
MAKLKLIKIDGSFETEPVKLSPGLIAKELKQQPVFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGSTR
NPHFVGGGIVFGPKPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTEGKTKVMMQFLKSAKLLDKNVLFV
VNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANALLVEKEVLKALEGKFK
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation TKVmmQFLK 140 149 M
Oxidation TKVmMQFLK 140 149 M
Oxidation TKVMmQFLK 140 149 M
Oxidation VMmQFLK 142 149 M
Oxidation VMmQFLk 142 149 M
Oxidation VmMQFLK 142 149 M
Oxidation VmMQFLk 142 149 M
Oxidation VmmQFLK 142 149 M
Oxidation DLmLANALLVEk 190 202 M
Oxidation DLmLANALLVEK 190 202 M
Oxidation DLmLANALLVEKEVLK 190 206 M
Oxidation DLmLANALLVEKEVLKALEGK 190 211 M
GENE/PROTEIN rplD (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
2-211 SSF52166 (IPR002136) Ribosomal protein L4/L1e Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

0
18-209 PF00573 (IPR002136) Ribosomal protein L4/L1e Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005840'>'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0005840)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003735'>'structural' == '' ? '': 'structural'; 'constituent' == '' ? '': 'constituent'; 'of' == '' ? '': 'of'; 'ribosome' == '' ? '': 'ribosome'; ('GO' == '' ? '': 'GO';:0003735)

0
20-211 PTHR10746 (IPR013005) Ribosomal protein L4/L1e, bacterial-type 0
20-211 PTHR10746:SF2 (IPR015498) Ribosomal protein L4 Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006412'>'translation' == '' ? '': 'translation'; ('GO' == '' ? '': 'GO';:0006412)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0019843'>'rRNA' == '' ? '': 'rRNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0019843)

0
59-211 G3DSA:3.40.1370.10 (n.a.) NULL 4.2039e-45
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
13 195 182 - MAG5450 Mycoplasma agalactiae 104 283 4e-28 38.587 288
32 195 163 - MARTH_orf442 Mycoplasma arthritidis 84 243 2e-23 40.8537 249
3 143 140 - Caulobacter crescentus NA1000 2 139 0.00000000002 35.2113 150
32 212 180 - MCJ_001320 Mycoplasma conjunctivae 44 220 2e-25 38.1215 265
29 108 79 - MHO_2970 Mycoplasma hominis 143 222 2e-24 58.75 256
1 195 194 - Lactococcus lactis subsp. lactis KF147 1 191 9e-30 38.9744 306
1 192 191 - Bacillus subtilis subsp. subtilis 1 187 3e-29 39.5833 307
1 195 194 - MYCGA0520 Mycoplasma gallisepticum 1 192 3.00018e-42 45.1282 411
3 194 191 - MCAP_0695 Mycoplasma capricolum subsp. capricolum 2 190 4e-30 36.4583 307
1 194 193 - MG152 Mycoplasma genitalium 1 193 <1e-50 57.2165 561
20 154 134 - b3319 Escherichia coli 14 145 7e-18 36.2963 206
8 149 141 - Rv0702 Mycobacterium tuberculosis 19 153 9e-25 45.8333 265
3 194 191 - MSC_0744 Mycoplasma mycoides subsp. mycoides SC 2 190 1e-30 37.5 312
24 195 171 - MS53_0642 Mycoplasma synoviae 42 209 2e-26 38.9535 274
27 195 168 - MHP7448_0193 Mycoplasma hyopneumoniae 7448 34 198 8e-22 40.2367 235
23 129 106 - MMOB2360 Mycoplasma mobile 108 213 1e-28 53.271 293
18 192 174 - LIC_12872 Leptospira interrogans serovar Copenhage 16 188 2e-20 32.3864 227
1 192 191 - MYPE10170 Mycoplasma penetrans 1 193 1e-36 43.299 364
32 195 163 - Mycoplasma pulmonis 116 275 2e-26 40.9639 274
External IDs
Gene ID 
877182
GI 
13507905
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR002136|Ribosomal protein L4/L1e
InterPro 
IPR013005|Ribosomal protein L4/L1e, bacterial like
Old MP number 
MP665
Pathway 
Translation
PDB homologs 
1p86_C
PDB homologs 
1p85_C
PDB homologs 
1dmg_A
Pfam 
PF00573
PID 
g1674370
RefSeq 
NP_109854.1
Swiss-Prot protein ID 
RL4_MYCPN
phylomeDB tree 
RL4_MYCPN
UniProt 
P75579
Transcription
IMAGE BROWSERS

OPERON OP78 (Genomic Overview)
Region:217550-229680

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STRING image

STRING of Mpn166STRING legend

PDB image(s)

1p86

PDB 1p86

1p85

PDB 1p85

1dmg

PDB 1dmg
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