MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene rbgA (MPN656)
Name 
rbgA
Stable ID 
MPN656
Location 
781095 - 781910 -
Sequence 
    1  ATGGATACAT TTACCTCCGC AGTCAAGATT AACTGGTTTC CGGGTCACAT GAAGAAGACC
   61  CATGACCAAC TCAAAAAACT AGCTAGTAGT TTAGATGGTG TAATTGAGGT AGTTGATGCG
  121  CGTGCACCAA CGTTAACCCA AAACCCCGAA ATTACGGCTT ACTTTACCAA TAAACCGAAA
  181  CTCACTTTAG CTTTAAAGGC TGATTTAGCA CAAACAGTGG CTAACTCCAA TATTTTATGG
  241  GGAACCTTAA AGCAAGGTTT GCAACTTAAA CGCTTAGTTA TTAAGAAACT GCAAACTTTG
  301  TTTCAAGCAA AAAAGAATCA GTTAAAAGCC AAAGGTTTAT TAGTGCACCA GTTTCGGTTA
  361  GCGGTTATTG GAATGCCCAA CGTTGGTAAA TCCAGTTTAA TTAACTTGTT ACTAAATAAA
  421  AATCACTTAC AGGTAGCTAA TCGGGCTGGG GTTACCAAGT CAATGAGTTG AAACCAAATA
  481  AGTTCGGAGT TTTATTTGAG CGATACCCCA GGAGTCTTCT TTAAACGAAT TGATGAAATG
  541  GCTGTTGGTT ACAAGTTAGT TTTAACTAAC GTTATTAAAA GGGAAGTAGT CCCTTTGGAA
  601  GATGTAGGTG CGTTTGCTTT TTGTTATTTA AGCAAACATT ATCCGCAATT GTTACCATAT
  661  GAAGGTACAG ACTTCACTGA GTTTTTACAT AAATTTGCTA TCAGTCGTAA GTTGTTGCAA
  721  AAATCGAATC AGCTCAACAT TAATTTAGCG TGCGAACTGT TTGTTAGTGA ACTGATAAAC
  781  GGGAAGTACG GTAAACTGAG TTTTGAGTTA GATTAG
Download Sequence
Operon 
OP315
Operon location 
781243 - 784455
Protein (mpn656)
Name 
Ribosome biogenesis GTPase A
Stable ID 
Mpn656
Molecular Weight 
29810
Isoelectric Point 
10
Localization 
Cytoplasm
Comment ; GTP-binding protein; YlqF participates in the late step of 50 S ribosomal subunit assembly in Bacillus subtilis. YlqF is targeted to the premature 50 S subunit lacking ribosomal proteins L16 and L27 to assemble functional 50 S subunit through a GTPase activity-dependent conformational change of 23 S rRNA; J. Biol. Chem., Vol. 282, Issue 35, 25270-
Sequence 
MDTFTSAVKINWFPGHMKKTHDQLKKLASSLDGVIEVVDARAPTLTQNPEITAYFTNKPKLTLALKADLAQTVANSNILW
GTLKQGLQLKRLVIKKLQTLFQAKKNQLKAKGLLVHQFRLAVIGMPNVGKSSLINLLLNKNHLQVANRAGVTKSMSWNQI
SSEFYLSDTPGVFFKRIDEMAVGYKLVLTNVIKREVVPLEDVGAFAFCYLSKHYPQLLPYEGTDFTEFLHKFAISRKLLQ
KSNQLNINLACELFVSELINGKYGKLSFELD
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation mDTFTSAVK 1 10 M
Oxidation INWFPGHmK 10 19 M
Oxidation INWFPGHmKK 10 20 M
Oxidation LAVIGmPNVGK 120 131 M
Oxidation RIDEmAVGYK 176 186 M
Oxidation RIDEmAVGYKLVLTNVIKR 176 195 M
GENE/PROTEIN rbgA (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
7-271 PIRSF006230 (IPR016478) GTPase, MG442, predicted 0
10-269 TIGR03596 (IPR019991) GTP-binding protein, ribosome biogenesis, YlqF 0
16-189 SSF52540 (n.a.) NULL 3.80001e-30
23-174 G3DSA:3.40.50.300 (n.a.) NULL 2.9e-23
38-271 PTHR11089 (n.a.) NULL 4.69996e-41
38-271 PTHR11089:SF4 (n.a.) NULL 4.69996e-41
129-179 PF01926 (IPR002917) GTP-binding protein, HSR1-related Cellular Component:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005622'>'intracellular' == '' ? '': 'intracellular'; ('GO' == '' ? '': 'GO';:0005622)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005525'>'GTP' == '' ? '': 'GTP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005525)

0.00000048
178-262 G3DSA:1.10.1580.10 (IPR023179) GTP-binding protein, orthogonal bundle domain 0.0000000000000012
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
10 221 211 - MAG0870 Mycoplasma agalactiae 11 229 2e-28 32.1267 292
10 216 206 - MARTH_orf365 Mycoplasma arthritidis 2 216 0.00000000000009 28.5714 166
17 262 245 - MCJ_005710 Mycoplasma conjunctivae 1 261 2e-23 30.566 250
11 216 205 - MHO_2200 Mycoplasma hominis 3 216 3e-21 31.9444 229
10 214 204 - Lactococcus lactis subsp. lactis KF147 3 217 7e-30 33.3333 309
10 269 259 - Bacillus subtilis subsp. subtilis 3 278 3e-37 29.7101 376
10 269 259 - Bacillus subtilis subsp. subtilis 3 278 1e-37 30.0725 381
7 269 262 - MCAP_0543 Mycoplasma capricolum subsp. capricolum 2 287 1e-21 27.3356 234
1 271 270 - MG442 Mycoplasma genitalium 1 270 <1e-50 67.5277 923
10 218 208 - MS53_0664 Mycoplasma synoviae 14 229 4e-29 33.0275 299
8 218 210 - MHP7448_0087 Mycoplasma hyopneumoniae 7448 1 218 1e-18 28.125 209
12 216 204 - MMOB1190 Mycoplasma mobile 4 217 7e-23 31.3364 244
7 269 262 - MSC_0429 Mycoplasma mycoides subsp. mycoides SC 2 287 8e-22 27.3356 236
9 269 260 - MYCGA6220 Mycoplasma gallisepticum 5 272 <1e-50 38.1818 470
9 205 196 - MYPE530 Mycoplasma penetrans 6 202 1e-34 39.899 348
8 262 254 - Mycoplasma pulmonis 16 285 1e-27 28.3088 286
External IDs
Alias 
yqlf
COG 
COG1161R
Gene ID 
877013
GI 
13508395
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR002917|GTP-binding protein, HSR1-related
InterPro 
IPR005289|GTP-binding
Old MP number 
MP186
Pathway 
Regulation? Division and growth?
Pfam 
PF08477
Pfam 
PF01926
Pfam 
PF00350
PID 
g1673849
RefSeq 
NP_110345.1
Swiss-Prot protein ID 
RBGA_MYCPN
phylomeDB tree No orthologous found
UniProt 
P75135
Transcription
IMAGE BROWSERS

OPERON OP315 (Genomic Overview)
Region:781243-784455

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STRING image

STRING of Mpn656STRING legend

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