MyMpn Project

Gene mpn626 (MPN626)

Name	mpn626
Stable ID	MPN626
Location	752025 - 752543 +
Sequence	1 ATGAAACTAC AAATTTTTAA TACAAAGCTA GGATTACTAG CAGCTAAGAT TTACTGAAAG 61 TCCTGGAGAC ACCTAGGACT GTCTGAAGAT GAAATTGTGT CAATTGCGCT CCACGCCGAG 121 CATGACTCCA AGAAGCGCTA TGACCCCAAA TACGGTTTGA GCTTTGAGAC CTACTTGAAG 181 TTAAATGGTG CTAACTTCAT TAAGTCGAGT TACCGTAGCT TAATGAATAA GGTTGATGAC 241 TGAATTGGCT TTAAGGACAT GAAAACACTC GAGGAACAAA ACACAGTCTC TTACACTCCT 301 GAAAACTATT TAAGAAGTGT AGAATTCCGT GAAATGGTGC ACTTAGCGTT TAAGAAAGCC 361 AAGAATGAGG ATGAACGTCA GGTGTTTGCG CTTTATGTAA AGGGTTACAA AAATTTAGAG 421 ATTGCTAAAA AACTCAACCT AACGACCCGT AGAGTGCGCT ACCTAATTTC AATCTTTAAG 481 GATCACATTA AGGTATTGAC TAAACGGTAT GGTTACTAG
Download Sequence
Operon	OP250
Operon location	752050 - 752530

Protein (mpn626)

Name	Probable RNA polymerase sigma-D factor (sigD)
Stable ID	Mpn626
Molecular Weight	18920
Isoelectric Point	10
Localization	Cytoplasm
Comment	(Microbiology, 2002, 148:3764); Transcription factor sigma-like
Sequence	MKLQIFNTKLGLLAAKIYWKSWRHLGLSEDEIVSIALHAEHDSKKRYDPKYGLSFETYLKLNGANFIKSSYRSLMNKVDD WIGFKDMKTLEEQNTVSYTPENYLRSVEFREMVHLAFKKAKNEDERQVFALYVKGYKNLEIAKKLNLTTRRVRYLISIFK DHIKVLTKRYGY

Post translational modifications

No post translational modifications were found

GENE/PROTEIN mpn626 (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
4-163	TIGR02937 (IPR014284)	RNA polymerase sigma-70	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006352'>'transcription' == '' ? '': 'transcription'; 'initiation' == '' ? '': 'initiation'; ('GO' == '' ? '': 'GO';:0006352) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:'of' == '' ? '': 'of';'>'regulation' == '' ? '': 'regulation'; 'of' == '' ? '': 'of'; 'transcription' == '' ? '': 'transcription'; Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003700'>'sequence' == '' ? '': 'sequence';-'specific' == '' ? '': 'specific'; 'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; 'transcription' == '' ? '': 'transcription'; 'factor' == '' ? '': 'factor'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003700) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016987'>'sigma' == '' ? '': 'sigma'; 'factor' == '' ? '': 'factor'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0016987)		0.0083
123-156	PF08281 (IPR013249)	RNA polymerase sigma factor 70, region 4 type 2	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006352'>'transcription' == '' ? '': 'transcription'; 'initiation' == '' ? '': 'initiation'; ('GO' == '' ? '': 'GO';:0006352) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:'of' == '' ? '': 'of';'>'regulation' == '' ? '': 'regulation'; 'of' == '' ? '': 'of'; 'transcription' == '' ? '': 'transcription'; Molecular Function: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003700'>'sequence' == '' ? '': 'sequence';-'specific' == '' ? '': 'specific'; 'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; 'transcription' == '' ? '': 'transcription'; 'factor' == '' ? '': 'factor'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003700) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016987'>'sigma' == '' ? '': 'sigma'; 'factor' == '' ? '': 'factor'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0016987)		0.045
124-157	G3DSA:1.10.10.10 (IPR011991)	Winged helix-turn-helix transcription repressor DN			0.0000044

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	172	171	- MG428	Mycoplasma genitalium	1	171	<1e-50	67.4419	609
13	163	150	- MYCGA0810	Mycoplasma gallisepticum	21	169	0.00000004	24.8447	116

External IDs

Gene ID	877327
GI	13508365
GO	Transcription
Home COG	K
InterPro	IPR013249\|Sigma-70, region 4 type 2
InterPro	IPR013325\|Sigma factor, region 2
InterPro	IPR011991\|Winged helix repressor DNA-binding
Old MP number	MP216
Pathway	Regulation, transcription, TF?
Pfam	PF00196
Pfam	PF07710
Pfam	PF08281
PID	g1673881
RefSeq	NP_110315.1
Swiss-Prot protein ID	Y626_MYCPN
phylomeDB tree	No orthologous found
UniProt	P75169

Transcription

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OPERON OP250 (Genomic Overview)

Region:752050-752530

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