MyMpn Project

1 ATGGCTACAA ATCTTAAATC AACCGCTAAA CTAGTTAAAC CAATTCAGTA CGATGAGGTA 61 ATTGAAGTAG AACGCATCTT TGCTGACCCT GCTTTTATTG AACAACACCG CCAACGGATC 121 TTAGCTTCCT TTAAGGACGC TAAGGAAAGT GCGCTTTATC ATGAACTAAC GCACATTGTC 181 ATTAAGGACA ACCTCTTTTC CTGTGCCATG AATGCTATTG TGGGTTACTT TGAATTCAAC 241 ATCGATGAAG CTGAATTGAA GAATGTCATG GAAGGTCTAA AGCGTGATGT GATTCAGGGC 301 GCTGAGGACA ACACCGTGCA AGCAATTGCT GAAAAAATTA TTAAGAAGGC TTTAGTGTTT 361 AACCACCTCC AAAAAGAATG GAAAGTGGAA ATCACTGATG AAGTGGTGAA GAATGTAATT 421 AGTCTTTATT ACGAAAAAAC CAATCAAAGT GTGCGCGAAT ACTTGGATGA TAAACAAAAG 481 TTTGAGGGTG TGCGTACAGC CTTGCTAGAA GAGCGCATGG TGTTAGAAAC CATCAACCAC 541 TTTAAATTTC ACTTTAACTT AACTGGACAA TTACCAAACT AA

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
28-182	SSF109998 (IPR008880)	Trigger factor, C-terminal, bacterial	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006457'>'protein' == '' ? '': 'protein'; 'folding' == '' ? '': 'folding'; ('GO' == '' ? '': 'GO';:0006457) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0015031'>'protein' == '' ? '': 'protein'; 'transport' == '' ? '': 'transport'; ('GO' == '' ? '': 'GO';:0015031)		0.00000012
61-174	PF05698 (IPR008880)	Trigger factor, C-terminal, bacterial	Biological Process: <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0006457'>'protein' == '' ? '': 'protein'; 'folding' == '' ? '': 'folding'; ('GO' == '' ? '': 'GO';:0006457) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0015031'>'protein' == '' ? '': 'protein'; 'transport' == '' ? '': 'transport'; ('GO' == '' ? '': 'GO';:0015031)		0.11

Name	mpn555
Stable ID	MPN555
Location	675067 - 675648 -
Sequence	1 ATGGCTACAA ATCTTAAATC AACCGCTAAA CTAGTTAAAC CAATTCAGTA CGATGAGGTA 61 ATTGAAGTAG AACGCATCTT TGCTGACCCT GCTTTTATTG AACAACACCG CCAACGGATC 121 TTAGCTTCCT TTAAGGACGC TAAGGAAAGT GCGCTTTATC ATGAACTAAC GCACATTGTC 181 ATTAAGGACA ACCTCTTTTC CTGTGCCATG AATGCTATTG TGGGTTACTT TGAATTCAAC 241 ATCGATGAAG CTGAATTGAA GAATGTCATG GAAGGTCTAA AGCGTGATGT GATTCAGGGC 301 GCTGAGGACA ACACCGTGCA AGCAATTGCT GAAAAAATTA TTAAGAAGGC TTTAGTGTTT 361 AACCACCTCC AAAAAGAATG GAAAGTGGAA ATCACTGATG AAGTGGTGAA GAATGTAATT 421 AGTCTTTATT ACGAAAAAAC CAATCAAAGT GTGCGCGAAT ACTTGGATGA TAAACAAAAG 481 TTTGAGGGTG TGCGTACAGC CTTGCTAGAA GAGCGCATGG TGTTAGAAAC CATCAACCAC 541 TTTAAATTTC ACTTTAACTT AACTGGACAA TTACCAAACT AA
Download Sequence
Operon	OP353
Operon location	670575 - 677306

Name	DNA/RNA binding
Stable ID	Mpn555
Molecular Weight	21230
Isoelectric Point	6
Localization	Cytoplasm
Comment	C-terminus of bacterial trigger factor protein, chaperone activity? (J Biol Chem, 2006, 281: 31963); also has a zinc protease domain; Has some signifricant homlogy to RNA and DNA binding proteins.
Sequence	MATNLKSTAKLVKPIQYDEVIEVERIFADPAFIEQHRQRILASFKDAKESALYHELTHIVIKDNLFSCAMNAIVGYFEFN IDEAELKNVMEGLKRDVIQGAEDNTVQAIAEKIIKKALVFNHLQKEWKVEITDEVVKNVISLYYEKTNQSVREYLDDKQK FEGVRTALLEERMVLETINHFKFHFNLTGQLPN

Modification	Modified sequence	Relative start	Relative end	Amino acid
Methylation	lVkPIQYDEVIEVER	11	26	K
Oxidation	NVmEGLKR	88	96	M
Oxidation	NVmEGLkr	88	96	M
Oxidation	mVLETINHFK	173	183	M
Oxidation	mVLETINHFk	173	183	M

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	193	192	- MG377	Mycoplasma genitalium	1	193	<1e-50	84.456	874
5	193	188	- MYCGA1730	Mycoplasma gallisepticum	1	189	<1e-50	45.0262	442
5	192	187	- MYPE2040	Mycoplasma penetrans	4	194	6e-28	32.8125	288

Gene ID	877212
GI	13508294
GO	Post-translational modification, protein turnover, chaperones
Home COG	O
InterPro	IPR006025\|Peptidase M, neutral zinc metallopeptidases, zinc-binding site
Old MP number	MP287
Pathway	Protein degradation? Regulation?
PDB homologs	1ZXJ
Pfam	PF05698
PID	g1673958
RefSeq	NP_110244.1
Swiss-Prot protein ID	Y555_MYCPN
phylomeDB tree	Y555_MYCPN
UniProt	P75223