MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene yqaJ (MPN551)
Name 
yqaJ
Stable ID 
MPN551
Location 
671403 - 672248 -
Sequence 
    1  ATGGGATTTA CCAAACAGTA CAAAATCGAT TTTGATATTA TTGACAACCA AATAGTTTTG
   61  TCAAACAACT ATTTTCAAAA ACATAAAGGT AGTTTTCGCA AGATTACCGG TACCCGATTT
  121  GGTAAAGTAA TAGGTATTTC TGAGTATGAA ACTTCACTTA AAACTTGAGC TAACATGGTC
  181  AAGATTTATG AGGATGAATT TGATGAAACA CTCTCACGCG CGGGGCAAGT TATTGAACCC
  241  AAAATCCGTG ATTATGTGAT AGCTAAAACT GGTTTTAATT TCCATTCGTA TGATCCCAAG
  301  GAGGTTAAGT GGGATCTCTT TCCTGAAAAT CCAGTTTTTG GAGGAATTCC TGATGGGGAA
  361  CCGGTCGATG TTTATGGAAA ATTGGCTTAC GATACCAATG CGCCGATGTT AGAAATTAAA
  421  ACCACTTCCT GTGATTCTTT GGTCTATAAA AAGATTAACG GTAACCTCAA AATTGTGTTT
  481  GATGAAAACG GCATGCCGAT TGTCAAAAAG ATTAACGGAA AGAAAGATAG TTGGTTTGAC
  541  AGTAACGGCA AAATCGTGAT TAGCCCGGCT TACTATTGCC AAATTGGGTT GTATTTGTAC
  601  TTGCGCAATA TTACCAAAGG AATGTTTGCG ATTGCTTTTT TAGAACCACA AGACTATGTG
  661  CATCCCGAAT GGTTTGAAGC AAAGCAACGC GACATCCGTT TGGTACCAGT ACAAATTGAT
  721  CGCAAGGCCT TTGAAGTTTT AACTAATAAA GCACAGCTGT GGTACAACAG TTTTATTCGT
  781  ACTGGTAAAA GTCCACAATT AACCTCACAA GACTGGGAGT GACTGAGAGA AAATGGGATT
  841  GCATAA
Download Sequence
Operon 
OP353
Operon location 
670575 - 677306
Protein (mpn551)
Name 
Uncharacterized protein yqaJ
Stable ID 
Mpn551
Molecular Weight 
30910
Isoelectric Point 
8
Localization 
Cytoplasm
Comment YqaJ recombinase family. This protein family is found in many different bacterial species but is of viral origin. The protein forms an oligomer and functions as a processive alkaline exonuclease that digests linear double-stranded DNA. Pulled down with DNA pol (Kuehner et al., 2010)
Sequence 
MGFTKQYKIDFDIIDNQIVLSNNYFQKHKGSFRKITGTRFGKVIGISEYETSLKTWANMVKIYEDEFDETLSRAGQVIEP
KIRDYVIAKTGFNFHSYDPKEVKWDLFPENPVFGGIPDGEPVDVYGKLAYDTNAPMLEIKTTSCDSLVYKKINGNLKIVF
DENGMPIVKKINGKKDSWFDSNGKIVISPAYYCQIGLYLYLRNITKGMFAIAFLEPQDYVHPEWFEAKQRDIRLVPVQID
RKAFEVLTNKAQLWYNSFIRTGKSPQLTSQDWEWLRENGIA
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation LAYDTNAPmLEIK 128 141 M
Oxidation IVFDENGmPIVK 158 170 M
GENE/PROTEIN yqaJ (Domains Overview)
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Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
25-143 PF09588 (IPR019080) YqaJ viral recombinase family 0.000038
34-216 G3DSA:3.90.320.10 (IPR011604) Exonuclease, phage-type/RecB, C-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003677'>'DNA' == '' ? '': 'DNA'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003677) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004518'>'nuclease' == '' ? '': 'nuclease'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004518)

0.00000086
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
15 234 219 - MAG6220 Mycoplasma agalactiae 16 214 0.00000009 22.6496 114
7 266 259 - MARTH_orf309 Mycoplasma arthritidis 15 238 0.000000000000002 23.1343 180
5 275 270 - MCJ_004720 Mycoplasma conjunctivae 6 251 3e-20 25.4355 222
3 270 267 - MHO_1720 Mycoplasma hominis 18 245 2e-16 23.5294 189
1 280 279 - MG373 Mycoplasma genitalium 1 280 <1e-50 72.8571 1134
12 267 255 - MS53_0395 Mycoplasma synoviae 15 240 0.00000000000002 25.2788 172
5 268 263 - MHP7448_0147 Mycoplasma hyopneumoniae 7448 11 240 2e-16 24.2647 190
32 266 234 - MMOB3080 Mycoplasma mobile 45 240 0.00000000000003 24.4726 170
11 280 269 - MYCGA5010 Mycoplasma gallisepticum 35 304 <1e-50 46.6667 662
1 277 276 - MYPE3040 Mycoplasma penetrans 1 277 <1e-50 44.7653 644
13 265 252 - Mycoplasma pulmonis 19 242 0.000000000002 24.9057 156
External IDs
Gene ID 
877295
GI 
13508290
GO 
DNA replication, recombination and repair
Home COG 
L
Old MP number 
MP291
Pathway 
Regulation? Division? 
Pfam 
PF09588
PID 
g1673962
RefSeq 
NP_110240.1
Swiss-Prot protein ID 
Y551_MYCPN
phylomeDB tree 
Y551_MYCPN
UniProt 
P75227
Transcription
IMAGE BROWSERS

OPERON OP353 (Genomic Overview)
Region:670575-677306

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STRING of Mpn551STRING legend

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