MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene deaD (MPN443)
Name 
deaD
Stable ID 
MPN443
Location 
536526 - 537755 -
Sequence 
    1  ATGCACTTCA TTCAACCACT CCAAGCGTTC TTACAAACGA AGCACATTGT TGAATTTTCA
   61  TCTATTCAAC AAGCTGTGTT TAAAGTTTGA CCACGTCAAA ATGTGGTTGG CATAGCCGAA
  121  ACTGGTAGTG GTAAAACATT CGCTTACCTC TTACCAGCGC TCAACCAAAT TGATGTCACG
  181  CTCAACAAGC CCCAAGCGGT GGTGTTTGTA CCAACTAAGG AGTTGAAGTG GCAAATTTTA
  241  ACGATCCTCA ACGACATTAA AGCCAGCTTT ACTGGTTTAA AGGTCAGTGA GAACTTCAAC
  301  AGTAATGCCC ACCTGATTGT GAGCTTAATT GGCAAAGACA TTATTCTCCA CGAAACGATT
  361  AAGTACGTTG TCTTTGATGA GGTCGACATG TTTTTGGAGG ACAGTTCCCA AGCAGAGTGG
  421  ATTAACTGTG TCCAACTGTT TCAAAAACAT AAACCTCACT TTGGCTTTTT TAGTGCCACG
  481  TTATTTAACG AACAGCTCCA GCAAATTCGC AAGCAAGTCG CACCTTTAAC GGTCGTCAAC
  541  CAAAAGAAAC GTGCTTGAAA GCACTCTTTG GTGAAACACT TTCTGCTTAA CCTCAACGGT
  601  CAAGAACCGT TTGCTGGTTT ATTAGCTTTA CTCAACTACC ACCATAACGA ACAGGTCTTG
  661  GTCTTTTGTT CCAACGCTAA ATCACTCAAA CAACTCACTA GTTTACTAGC CCACAACCAA
  721  CTTAGCTTTA AAAGCCTCCA TGGTCAACTA ACGCCCAATG AGCGCAAACA CATCTTTACT
  781  AGTGCCGCTA ATAACACGGT GAGGGTACTA GTGGTATCTG ACTTACTAGC ACGCGGCATT
  841  GATCTGCCCC ACTTTAGTGT GGTCATTTCA TGAGACTTAC CCCTAGTGGA TAGCTTTTAC
  901  ATCCACCGTT CTGGTAGAGT AGCGCGTTTT AACAGTTGGG GCAATTCCTA TGTGTTTGAT
  961  TTACCGCATA ACCAACACAA ATTAACTAAG TTTGCCCATA AAGGTATTTT GTTTAACAGT
 1021  GTTCATTTAG AACGTGATGG TACTTTAAAG TTCCCCCAAC TTAAACAAAG CAAACAAAAA
 1081  CCAGCAGTAT CCAGTGAACT TAAAACTGCC ATTAAGCGGA TTAAGGCAGG ATACAAGAAG
 1141  GTCAAGCCTA ACTATAAGAA GCGCCAAAAG CAGCAGATTG CGGAACTCTT TGCCAAGCGC
 1201  AAACAACGCC GTTCATGAAA AAACTTCTAA
Download Sequence
Operon 
OP411
Operon location 
535900 - 541758
Protein (mpn443)
Name 
Probable ATP-dependent RNA helicase  (EC 3.6.1.-)
Stable ID 
Mpn443
Molecular Weight 
44990
Isoelectric Point 
11
Localization 
Cytoplasm
Comment -
Sequence 
MHFIQPLQAFLQTKHIVEFSSIQQAVFKVWPRQNVVGIAETGSGKTFAYLLPALNQIDVTLNKPQAVVFVPTKELKWQIL
TILNDIKASFTGLKVSENFNSNAHLIVSLIGKDIILHETIKYVVFDEVDMFLEDSSQAEWINCVQLFQKHKPHFGFFSAT
LFNEQLQQIRKQVAPLTVVNQKKRAWKHSLVKHFLLNLNGQEPFAGLLALLNYHHNEQVLVFCSNAKSLKQLTSLLAHNQ
LSFKSLHGQLTPNERKHIFTSAANNTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFYIHRSGRVARFNSWGNSYVFD
LPHNQHKLTKFAHKGILFNSVHLERDGTLKFPQLKQSKQKPAVSSELKTAIKRIKAGYKKVKPNYKKRQKQQIAELFAKR
KQRRSWKNF
Post translational modifications
No post translational modifications were found
GENE/PROTEIN deaD (Domains Overview)
Click on the features to jump to domain info

 ExportIMG
Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-404 PTHR10967 (n.a.) NULL 0
5-171 G3DSA:3.40.50.300 (n.a.) NULL 4.5e-26
15-194 SM00487 (IPR014001) DEAD-like helicase, N-terminal 6.39999e-21
21-167 PF00270 (IPR011545) DNA/RNA helicase, DEAD/DEAH box type, N-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008026'>'ATP' == '' ? '': 'ATP';-'dependent' == '' ? '': 'dependent'; 'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0008026)

6.5e-17
22-331 SSF52540 (n.a.) NULL 3.22299e-44
26-179 PS51192 (IPR014021) Helicase, superfamily 1/2, ATP-binding domain 0
181-327 G3DSA:3.40.50.300 (n.a.) NULL 5.6e-31
190-349 PS51194 (IPR001650) Helicase, C-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)

0
230-311 SM00490 (IPR001650) Helicase, C-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)

2.5e-20
236-311 PF00271 (IPR001650) Helicase, C-terminal Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003676'>'nucleic' == '' ? '': 'nucleic'; 'acid' == '' ? '': 'acid'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0003676) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0004386'>'helicase' == '' ? '': 'helicase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0004386) <'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0005524'>'ATP' == '' ? '': 'ATP'; 'binding' == '' ? '': 'binding'; ('GO' == '' ? '': 'GO';:0005524)

8.5e-16
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
7 330 323 - Caulobacter crescentus NA1000 14 360 8e-25 24.8603 269
1 319 318 - Caulobacter crescentus NA1000 7 348 3e-19 25.7971 221
39 327 288 - Caulobacter crescentus NA1000 43 353 2e-19 24.3077 223
20 319 299 - Lactococcus lactis subsp. lactis KF147 25 342 2e-21 26.2997 238
29 408 379 - Lactococcus lactis subsp. lactis KF147 35 432 4e-32 27.1635 330
17 319 302 - Bacillus subtilis subsp. subtilis 23 343 1e-28 26.8293 305
18 345 327 - Bacillus subtilis subsp. subtilis 35 383 3e-27 26.8571 292
23 334 311 - Bacillus subtilis subsp. subtilis 32 358 4e-28 28.3988 300
33 328 295 - Bacillus subtilis subsp. subtilis 27 339 1e-22 25.6881 253
33 328 295 - Bacillus subtilis subsp. subtilis 41 353 2e-22 25.6881 251
18 319 301 - Bacillus subtilis subsp. subtilis 24 343 2e-28 27.4627 301
23 334 311 - Bacillus subtilis subsp. subtilis 32 358 2e-28 28.7009 301
18 345 327 - Bacillus subtilis subsp. subtilis 26 374 4e-27 26.5714 291
33 314 281 - MT3307 Mycobacterium tuberculosis 48 368 7e-16 22.9814 192
33 322 289 - b3780 Escherichia coli 47 369 7e-18 25 209
33 319 286 - b3162 Escherichia coli 44 348 2e-23 23.511 256
33 332 299 - b2576 Escherichia coli 42 364 2e-22 26.2346 249
39 327 288 - b1343 Escherichia coli 47 352 2e-25 28.7097 275
23 334 311 - b0797 Escherichia coli 29 362 1e-18 24.1176 216
5 400 395 - MG425 Mycoplasma genitalium 12 427 1e-21 24.356 235
1 409 408 - MG308 Mycoplasma genitalium 1 410 <1e-50 58.7805 1182
20 328 308 - Rv1253 Mycobacterium tuberculosis 37 362 4e-27 25.7396 289
17 378 361 - MCAP_0500 Mycoplasma capricolum subsp. capricolum 19 403 2e-31 27.5064 321
20 319 299 - MMOB2800 Mycoplasma mobile 25 348 4e-18 24.0122 205
17 378 361 - MSC_0469 Mycoplasma mycoides subsp. mycoides SC 19 403 5e-28 27.2494 292
18 358 340 - LIC_13230 Leptospira interrogans serovar Copenhage 31 386 2e-24 24.7956 265
206 329 123 - LIC_12689 Leptospira interrogans serovar Copenhage 221 340 0.000002 23.3871 110
33 319 286 - LIC_10738 Leptospira interrogans serovar Copenhage 39 345 1e-16 21.875 198
1 402 401 - MYCGA5040 Mycoplasma gallisepticum 1 431 <1e-50 32.0186 512
3 339 336 - MYPE8030 Mycoplasma penetrans 1 364 2e-35 28.7634 356
20 319 299 - Mycoplasma pulmonis 25 342 2e-28 25.2336 295
External IDs
COG 
COG0513LKJ
EC number 
3.6.1.-
Gene ID 
877046
GI 
13508182
GO 
Translation, ribosomal structure and biogenesis
Home COG 
J
InterPro 
IPR001650|Helicase, C-terminal
InterPro 
IPR011545|DEAD/DEAH box helicase, N-terminal
InterPro 
IPR014001|DEAD-like helicases, N-terminal
InterPro 
IPR014021|Helicase superfamily 1 and 2 ATP-binding
Old MP number 
MP398
Pathway 
Translation
PDB homologs 
1A1V-A
Pfam 
PF00270
Pfam 
PF00271
Pfam 
PF04851
PID 
g1674080
RefSeq 
NP_110131.1
Swiss-Prot protein ID 
Y443_MYCPN
phylomeDB tree 
Y443_MYCPN
UniProt 
P75335
Transcription
IMAGE BROWSERS

OPERON OP411 (Genomic Overview)
Region:535900-541758

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STRING image

STRING of Mpn443STRING legend

PDB image(s)

1A1V

PDB 1A1V
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