MyMpn
The Mycoplasma pneumoniae database
 
e.g Mpn001 or dnaN or polymerase
Gene yidA (MPN427)
Name 
yidA
Stable ID 
MPN427
Location 
514727 - 515599 +
Sequence 
    1  ATGACAAAGA CAAGTAAAGC ATCCGGGTTA AGCTGGTTTT TTTGTGATTT AGATGGCACT
   61  TTACTGCGTT ACCAAAACAA CCAGCACTTA ATTGAACCAA CTACGAAGCG AGCAGTGGCA
  121  CAGTTAGTGG AGAGTGGTGC CAACTTTGTT GTAGCTACTG GACGCAAACC GAGTGACGTG
  181  CGCAACATTT ACAAGGAGTT GGGGATTGAA CAAGCCAGTC CCTACTTAAT TGCCAACAAC
  241  GGCGCGGTAG TGTGGGATTT AAAGCGCAAT AGCTACCTCA ACAAGCAAAC CTTGTCTTTA
  301  AGTGACTTTG ACTTAATTGA CCACATTAAC CAAACGTTAA ACCAATTAAA CCACGAGTAT
  361  GGCTGCATTC TGTATGGCCT AAACGACCAG GTGTACTTTT ATCATATCCA CGCTCCTGAC
  421  TCACAGGCCT TCAAACAGTA CTTTGCTTTT TATGAAGGCG AATTTGTCCA AAACCAGTAT
  481  CTGGAAATAG ATGGGCTCAA AACTGAATAC AATCTAGTTA AAGCCATTTG GTTCTTTAAG
  541  GAAGTGCACC AGCAAAAGGC GGTGATTGCG CAACACTTTA CTAACCAAGA ACGCTTGGTC
  601  ATTACTTCAG CACACTCGTT TGAACTAGTA CCGCTTAATG TATCAAAGGG TCATGCGATA
  661  AACCTAATTA AACAACAAGT AAAAATCACC GATAACCAGA TTATGGTCCT TGGTGACTCT
  721  TACAATGACT TGCCAATGTT TCAACATGGT GTAGTTAAGG TAACTAATCA CCTCGCACCC
  781  GACAACCTCA AACAACTAGC TACAAGGGTT TATGAACTAC CAGCTTCACT GTTTGTGGGT
  841  CAAGCGTTGA ACGACTACTT TAAGTTCGAT TAA
Download Sequence
Operon 
OP181
Operon location 
514480 - 516200
Protein (mpn427)
Name 
P-sugar phosphatase  YidA (Canadian consortium)
Stable ID 
Mpn427
Molecular Weight 
31900
Isoelectric Point 
7
Localization 
SIGNALP
Comment acetyl-P, fructose-1-P , ribose-5-P and glucose-6-P were substrates for YbiV (HAD12), YidA (HAD13), YniC (HAD1), and YfbT (HAD2); YidA (HAD13) and YbiV (HAD12) yielded fructose as the final product of fructose 1,6-bis-P hydrolysis (data not shown), which is compatible with their ability to dephosphorylate both fructose 1- and 6-phosphates
Sequence 
MTKTSKASGLSWFFCDLDGTLLRYQNNQHLIEPTTKRAVAQLVESGANFVVATGRKPSDVRNIYKELGIEQASPYLIANN
GAVVWDLKRNSYLNKQTLSLSDFDLIDHINQTLNQLNHEYGCILYGLNDQVYFYHIHAPDSQAFKQYFAFYEGEFVQNQY
LEIDGLKTEYNLVKAIWFFKEVHQQKAVIAQHFTNQERLVITSAHSFELVPLNVSKGHAINLIKQQVKITDNQIMVLGDS
YNDLPMFQHGVVKVTNHLAPDNLKQLATRVYELPASLFVGQALNDYFKFD
Post translational modifications
Modification Modified sequence Relative start Relative end Amino acid
Oxidation ITDNQIMVLGDSYNDLPmFQHGVVk 229 254 M
Oxidation ITDNQIMVLGDSYNDLPmFQHGVVK 229 254 M
Oxidation ITDNQImVLGDSYNDLPmFQHGVVK 229 254 M
Oxidation ITDNQImVLGDSYNDLPMFQHGVVK 229 254 M
GENE/PROTEIN yidA (Domains Overview)
Click on the features to jump to domain info

 ExportIMG
Domains (InterProScan)
Location (aa) Name (InterPro ID) Description GO terms Sequence Evalue
1-290 SSF56784 (n.a.) NULL 1.10001e-40
12-94 G3DSA:3.40.50.1000 (n.a.) NULL 3.6e-35
12-256 TIGR01484 (IPR006379) HAD-superfamily hydrolase, subfamily IIB Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0003824'>'catalytic' == '' ? '': 'catalytic'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0003824)

0.000000017
12-283 TIGR00099 (IPR000150) Cof protein Biological Process:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0008152'>'metabolic' == '' ? '': 'metabolic'; 'process' == '' ? '': 'process'; ('GO' == '' ? '': 'GO';:0008152)

Molecular Function:
<'A' == '' ? '': 'A'; 'class' == '' ? '': 'class';=''result' == '' ? '': 'result';' 'target' == '' ? '': 'target';='_'blank' == '' ? '': 'blank';' 'href' == '' ? '': 'href';=''http' == '' ? '': 'http';://'amigo' == '' ? '': 'amigo';.'geneontology' == '' ? '': 'geneontology';.'org' == '' ? '': 'org';/'cgi' == '' ? '': 'cgi';-'bin' == '' ? '': 'bin';/'amigo' == '' ? '': 'amigo';/'term' == '' ? '': 'term';-'details' == '' ? '': 'details';.'cgi' == '' ? '': 'cgi';?'term' == '' ? '': 'term';='GO' == '' ? '': 'GO';:0016787'>'hydrolase' == '' ? '': 'hydrolase'; 'activity' == '' ? '': 'activity'; ('GO' == '' ? '': 'GO';:0016787)

0
13-271 PF08282 (IPR013200) HAD superfamily hydrolase-like, type 3 1.3e-39
206-271 G3DSA:3.40.50.1000 (n.a.) NULL 3.6e-35
Protein Homology (BLASTP results)
Protein Start Protein End Hit Size Orthologous Organism Orthologous Start Orthologous End Evalue Identity Score Alignment
207 287 80 - MAG1840 Mycoplasma agalactiae 202 283 0.000006 29.2683 99
13 93 80 - MAG4360 Mycoplasma agalactiae 6 80 0.000004 35.3659 100
14 286 272 - MAG5100 Mycoplasma agalactiae 8 261 0.000002 23.7762 104
13 255 242 - MAG5280 Mycoplasma agalactiae 86 314 0.0000002 25 111
13 290 277 - MAG6900 Mycoplasma agalactiae 7 269 0.000000002 24.3816 130
13 270 257 - MARTH_orf028 Mycoplasma arthritidis 8 248 0.00000000001 23.7037 148
16 270 254 - MARTH_orf242 Mycoplasma arthritidis 17 265 0.0000000002 26.9784 137
16 267 251 - MCJ_002620 Mycoplasma conjunctivae 17 268 0.000007 22.7273 99
15 270 255 - MCJ_005120 Mycoplasma conjunctivae 9 248 0.000008 22.9323 98
14 247 233 - MHO_3450 Mycoplasma hominis 17 242 0.00000000002 25 145
16 247 231 - Lactococcus lactis subsp. lactis KF147 11 227 0.000001 23.9316 108
16 290 274 - Lactococcus lactis subsp. lactis KF147 8 268 0.000001 25.6228 108
15 262 247 - Lactococcus lactis subsp. lactis KF147 7 251 0.000007 23.6162 102
16 248 232 - Bacillus subtilis subsp. subtilis 8 228 0.0000000001 23.75 147
15 270 255 - Bacillus subtilis subsp. subtilis 6 268 0.000000000006 25.9786 159
16 270 254 - Bacillus subtilis subsp. subtilis 7 264 0.0000000002 25.6055 146
14 270 256 - Bacillus subtilis subsp. subtilis 20 250 0.0000002 24.8062 119
16 283 267 - Bacillus subtilis subsp. subtilis 16 244 0.0000000002 22.3048 144
16 283 267 - Bacillus subtilis subsp. subtilis 16 244 0.0000000002 22.3048 144
15 270 255 - Bacillus subtilis subsp. subtilis 6 268 0.000000000008 25.9786 157
16 248 232 - Bacillus subtilis subsp. subtilis 8 228 0.0000000001 23.75 146
15 263 248 - MT3922 Mycobacterium tuberculosis 11 249 0.000000000000003 25 185
9 267 258 - b3697 Escherichia coli 2 248 1e-18 26.1538 215
16 257 241 - b3826 Escherichia coli 8 235 0.00000000000009 26.506 172
16 274 258 - b0446 Escherichia coli 8 244 0.00000002 24.4275 127
175 268 93 - MG125 Mycoplasma genitalium 162 257 0.000005 27.0833 98
16 248 232 - MCAP_0732 Mycoplasma capricolum subsp. capricolum 8 233 0.00000000005 24.6862 144
14 270 256 - MCAP_0834 Mycoplasma capricolum subsp. capricolum 9 258 0.00000003 20.8178 120
13 272 259 - MS53_0680 Mycoplasma synoviae 12 268 0.00001 22.4914 97
14 248 234 - MS53_0503 Mycoplasma synoviae 7 222 0.00000001 27.3469 123
13 273 260 - MS53_0032 Mycoplasma synoviae 14 276 0.00000001 23.3577 121
13 270 257 - MHP7448_0477 Mycoplasma hyopneumoniae 7448 10 261 0.0000000002 27.0758 138
12 248 236 - MHP7448_0208 Mycoplasma hyopneumoniae 7448 4 229 0.00000000006 27.5304 142
10 268 258 - MMOB0470 Mycoplasma mobile 7 262 0.0000000001 25.0923 140
10 283 273 - MMOB0450 Mycoplasma mobile 1 266 0.00000000000003 26.2976 171
10 248 238 - MSC_1065 Mycoplasma mycoides subsp. mycoides SC 1 231 0.0000003 22.6562 111
16 248 232 - MSC_0805 Mycoplasma mycoides subsp. mycoides SC 8 233 0.00000000003 24.0506 146
16 133 117 - MSC_0793 Mycoplasma mycoides subsp. mycoides SC 8 120 0.0000002 27.9661 113
13 248 235 - MSC_0241 Mycoplasma mycoides subsp. mycoides SC 12 248 0.000004 25.8964 101
14 98 84 - MSC_0073 Mycoplasma mycoides subsp. mycoides SC 9 90 0.0000007 31.7647 108
8 283 275 - MYCGA6200 Mycoplasma gallisepticum 3 285 3e-38 30.2083 378
1 268 267 - MYCGA5490 Mycoplasma gallisepticum 1 262 0.0000002 23.8596 112
16 85 69 - MYCGA5480 Mycoplasma gallisepticum 11 74 0.000007 37.1429 99
12 290 278 - MYPE8560 Mycoplasma penetrans 5 281 3e-16 25.4237 189
8 248 240 - MYPE5190 Mycoplasma penetrans 3 231 0.0000001 25.3906 116
14 284 270 - MYPE4950 Mycoplasma penetrans 8 292 0.000000000000002 25 182
16 249 233 - MYPE3170 Mycoplasma penetrans 507 735 0.000001 24.8996 106
16 272 256 - MYPE840 Mycoplasma penetrans 12 256 0.00000003 24.3346 121
16 267 251 - Mycoplasma pulmonis 15 263 0.000005 24.1509 100
10 248 238 - Mycoplasma pulmonis 6 224 0.0000000002 27.0161 138
External IDs
COG 
COG0561R
EC number 
3.1.-.-
Gene ID 
876743
GI 
13508166
GO 
General function prediction only
Home COG 
R
InterPro 
IPR013200|HAD superfamily hydrolase-like, type 3
InterPro 
IPR006379|HAD-superfamily hydrolase, subfamily IIB
InterPro 
IPR000150|Cof protein
Old MP number 
MP414
Pathway 
Growth control?
Pathway 
Metabolism
PDB homologs 
1nrw_A
PDB homologs 
1rkq_A
PDB homologs 
1nf2_A
Pfam 
PF08282
Pfam 
PF00702
Pfam 
PF05116
PID 
g1674098
RefSeq 
NP_110115.1
Swiss-Prot protein ID 
Y427_MYCPN
phylomeDB tree 
Y427_MYCPN
UniProt 
P75360
Transcription
IMAGE BROWSERS

OPERON OP181 (Genomic Overview)
Region:514480-516200

Click on the features to jump to a different MyMpn page

 ExportIMG MyGBrowser GBrowse
STRING image

STRING of Mpn427STRING legend

PDB image(s)

1nrw

PDB 1nrw

1rkq

PDB 1rkq

1nf2

PDB 1nf2
Site hosted by:
Copyright 2010-16, Luis Serrano group. All rights reserved.
All data provided for download in the MyMpn database is free to use. Upon doing so, please cite the original data source and the MyMpn database
CONTACT US