MyMpn Project

Gene secD (MPN396)

Name	secD
Stable ID	MPN396
Location	473551 - 476466 -
Sequence	1 GTGGGACTGA AAAAGCGGGT TTCCTTTGAC TGGCTCTTAA AGATTGGAAT TATCCTGGTC 61 TTAGCTTTTT TGGGCCTGTT TGGAATTATT TTTGGTAGTT ATAAGCTTCT AAACGACAGT 121 CGCTTAGGGG TAGTGTTCAA CGGTTCCACT ACCACCACTG TTTATTTTTT AAACCATAAG 181 TCCAAGGACG CTAACAAGGA GTTAGATCCT ACCCAGAAAA AGGACGGCAA TGGCAGCGGT 241 AACAATACTG AAATGATTAC CGATGTGAAC GGTTTTCTCA ACAATATTGA AAAGAGTTAC 301 GCCAACAGCC TCTACGCCCA GGGTTTTTCG TCTGTTAACA TCACGAAAAA CTCACACGAT 361 ACAAGTGCAA AAGAACTTTC AGATAAAGGA GTTTTTGACA GTTCTTGACT AGTTAATGAT 421 GGTTTACCCT CTATTTCTGT TACCTTTGAG CAACGTCGTG AAGAGGCGCG TACCCGAGCA 481 CGAAAGCGGC AAATAGATGC ACAGGTCAAG CGCAACGCTT TAAGTGCAAT TGAACACAAC 541 TACAAACTTT CGTTAGAAAC CACTGACGGA ATTGTTCTTT TTGACTCGTT TGATAAGGAA 601 TTTATTAGAA ATTCGCTTAC AGCAGTTGTT CCCCAAACCA CAAACACCAA CAGTGCCTTA 661 ACGTTTGAGT ACAAGCTCAG CAAAAATGTT ATTACCAAAG AATCTTTACA CAACGACTTT 721 TTGGACTTTA TTAAGAGTAA GAGTTTAACT GATTCTGACT ATAATACTGG TAATGGTCAA 781 AAGAGTGTTG AAGGTAGCGG TAAATGATTT AAAGACAAGG CTAACGGTAG TGCACAAAAC 841 GGAAATAAAA CTTTAGTTTT ATGGAAGGAT AAGGAAGGTG CAGTACAGTA TGTGCGCAAC 901 ATCTTTAACG TTCCTAAAGG TGGTACTGAT TACCTCACCT TTAACGAACG TGAAAAGAAC 961 CTCTGGGACT TCTTGCACGC TGAGGGTAAC TTTTCCTCTG GTGATAATTT GTTTTTGCAA 1021 AAAAATAATA ATGGTAATTC ACCAATTACC AAAGCTAGTG ACATTACCTT AAAAAATATC 1081 TATTACATCT ATGCAGCACC GACACATTTC TCACAAGTTG CAACCAAAGA CAATAACAAT 1141 AAGGACGCTG CTGATGTTGT CGCTGTAGCT AACAGCGCGG ACACTAGAAA ACTGCGCAGC 1201 GGTGATGCTA CTGGTTTTTC TGGTTTATTC TCCAATTACA TCTTGGCAGA AATTAGAACA 1261 GAAGATCCGG TAGCTAAGAA TGGTGATCCG GTTAAGGTAA ACGCCACTTT ACAAAGCTTT 1321 TTGGATAGCA ATAACCAACG CTTAGAACAC GGTGGTAACA TTAAGTTCCA AGTAGCTAAC 1381 TTTGTTAACA ATGATGGTTC ATACGTTCCT GCTTCTTACT TGGAAGCTAG TAGGGTAAAG 1441 GTGCTGTTGA GCAATGGTTT TCCCGAAACC GCTACCATTG CAGCTGCTAA CACCAAGTTA 1501 GTTAATGCAC CGCTTTCCAA CACTTTAGCA CGCGATGTTT CTAACTTTGC TTCGAGCTTC 1561 ATTGCCTTGG GTGTAATTAT CCTGCTCGCT ACAATTGCGT TAGGTATTCG TTACAAGCTA 1621 CTTGGCCTTT ACAAAGCCTT AGCCTTAGCG CTTAGTGCCA TCTCTTCGCT CGCCTTCTTT 1681 AGTGCCGTTG GTGGTGTCGT TGATGTCTTT TCGTTTGTCG GCATCTTCTT TGTGGTTGCC 1741 GTTAACATTA TTAACCTGAT CACTCTGGCG GAACTGTTTT TGCGTAACAT TAAGAACAAC 1801 GCCTCAATTG TGGAATCGTG AAAACTGTGT TTAAAACGTA GTTTCTTCAC GATGATAGAA 1861 ACCCACATTT GCTGGTTATT GAGTGCCTTA GTCGTGATTT ACCTCTCCAA CTACCAGGTA 1921 CAACAGTTAG GTACCTTAAT GGCAGTTTCA GCGATTACCT CTTACTTCTT AAACTATGGT 1981 TTAGGAGTAA TCTTAGTGTG GTTGTTTGTG TCATCCCATT CCGGGTTAGA ATGACGCTTC 2041 TTCCTCTATA AAAAGGACGC GCAAGCGTTG ACCAAAACAT CGAGTAACTA CTCGATCTTA 2101 ACGGAAAACA ACGACATCCA AACGGACTTC TTTATCAGTA AGAACCAGCA CGACTTCTTT 2161 GGTAAGAAAA AGTGGAGCTT GCTGTTTATT TGGTTGACAG TTCTCGCCTT TGGGGTGGTG 2221 ATGCTCGGCC TTTATCTGGG CGCACCACAA CTGTTAGGTA ACTTTTTAGC CGCTGACATC 2281 GAATCGAGTA CTGGCATTAT GTTAGGTGTG GGGGTGATTA GCTTGCTCTA TCTCTTGTAT 2341 TCGCTACCGC GCTATGGTGT CGCTTATGGG ATTAGCTACC TAATTGCTTT AATTCTGTTA 2401 GCCGCTGGAC TTTTTGGGGC AATGTACCTC GCTAACTTTA TCTTTAGGAT TGACCAGTCC 2461 ACAATTCAAC TAATTATCTT TGTGTACCTG TTCTGGCTGT TCTTCCAAGC CCGCATTGGT 2521 CAAACTACCA TTTGGACTTA CTGTTACTGG TTTAAACGCA GCTTGAAGGA CCGGGTCTTT 2581 GTGAAAAACC TCTTTAACGA CAATGTTAAC AGCCAATGAA GGTTAGATCT TATTGGTAGC 2641 AGTGTTTTAA TCCTACTCTT CATTGTGTAC GCTGCCTTTA ACTTTGGTGG TATTAACGGC 2701 ACGATTAACC TAGTGATCTT CTACTTAATT GCGATTGTGG CCTTGTTTAG CGTGTTTGTC 2761 AATGGCTTAC CGCTGTTTAG CTTTGGTTTA ATCAATGGTT GGTTAAGTCC GTACAACTAT 2821 GTCCAAATCC ATATTACCTT ACGCCACAAA AAGCAAATGT TTAAGGAAGT GGATCAAATT 2881 GAAGAACAGT TGATTAGTGG AATTAACAGC TTTTAA
Download Sequence
Operon	OP435
Operon location	473600 - 476487

Protein (mpn396)

Name	Protein-export membrane protein secD
Stable ID	Mpn396
Molecular Weight	106810
Isoelectric Point	9
Localization	TMHMM
Comment	-
Sequence	MGLKKRVSFDWLLKIGIILVLAFLGLFGIIFGSYKLLNDSRLGVVFNGSTTTTVYFLNHKSKDANKELDPTQKKDGNGSG NNTEMITDVNGFLNNIEKSYANSLYAQGFSSVNITKNSHDTSAKELSDKGVFDSSWLVNDGLPSISVTFEQRREEARTRA RKRQIDAQVKRNALSAIEHNYKLSLETTDGIVLFDSFDKEFIRNSLTAVVPQTTNTNSALTFEYKLSKNVITKESLHNDF LDFIKSKSLTDSDYNTGNGQKSVEGSGKWFKDKANGSAQNGNKTLVLWKDKEGAVQYVRNIFNVPKGGTDYLTFNEREKN LWDFLHAEGNFSSGDNLFLQKNNNGNSPITKASDITLKNIYYIYAAPTHFSQVATKDNNNKDAADVVAVANSADTRKLRS GDATGFSGLFSNYILAEIRTEDPVAKNGDPVKVNATLQSFLDSNNQRLEHGGNIKFQVANFVNNDGSYVPASYLEASRVK VLLSNGFPETATIAAANTKLVNAPLSNTLARDVSNFASSFIALGVIILLATIALGIRYKLLGLYKALALALSAISSLAFF SAVGGVVDVFSFVGIFFVVAVNIINLITLAELFLRNIKNNASIVESWKLCLKRSFFTMIETHICWLLSALVVIYLSNYQV QQLGTLMAVSAITSYFLNYGLGVILVWLFVSSHSGLEWRFFLYKKDAQALTKTSSNYSILTENNDIQTDFFISKNQHDFF GKKKWSLLFIWLTVLAFGVVMLGLYLGAPQLLGNFLAADIESSTGIMLGVGVISLLYLLYSLPRYGVAYGISYLIALILL AAGLFGAMYLANFIFRIDQSTIQLIIFVYLFWLFFQARIGQTTIWTYCYWFKRSLKDRVFVKNLFNDNVNSQWRLDLIGS SVLILLFIVYAAFNFGGINGTINLVIFYLIAIVALFSVFVNGLPLFSFGLINGWLSPYNYVQIHITLRHKKQMFKEVDQI EEQLISGINSF

Post translational modifications

No post translational modifications were found

GENE/PROTEIN secD (Domains Overview)

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Domains (InterProScan)

Location (aa)	Name (InterPro ID)	Description	GO terms	Sequence	Evalue
34-670	SSF82866 (n.a.)	NULL			1.4e-17

Protein Homology (BLASTP results)

Protein Start	Protein End	Hit Size	Orthologous	Organism	Orthologous Start	Orthologous End	Evalue	Identity	Score	Alignment
1	971	970	- MG277	Mycoplasma genitalium	1	970	<1e-50	61.287	3040
6	534	528	- MYCGA1880	Mycoplasma gallisepticum	2	512	<1e-50	31.6667	575
593	743	150	- MYCGA1880	Mycoplasma gallisepticum	571	723	0.000000000000009	30.1887	575

External IDs

Gene ID	877104
GI	13508135
GO	Intracellular trafficking, secretion and vesicular transport
Home COG	U
Old MP number	MP442
Pathway	Transporter, protein export
PDB homologs	1usl_A
PDB homologs	1o1x_A
PDB homologs	1nn4_A
PID	g1674129
RefSeq	NP_110084.1
Swiss-Prot protein ID	Y396_MYCPN
phylomeDB tree	Y396_MYCPN
UniProt	P75387

Transcription

IMAGE BROWSERS

OPERON OP435 (Genomic Overview)

Region:473600-476487

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STRING image

STRING legend

PDB image(s)

PDB 1usl

PDB 1o1x

PDB 1nn4