Datasets ~ Transcriptome For the data of M. pneumoniae please also see: Yus et al., 2012. Data of M. genitalium will be made available upon publication.
Species Description File(s)
Mpn DSS Not Fractionated (6h and 96h) 6h and 96h
Mpn Small RNAs RNAseqStrandSpecific (6h and 96h) plus and minus
Mpn RNASeqStrandSpecificGrowth curve 1 2
Datasets ~ Proteome
Species Description File(s)
Mge Growth curve file
Mge Gels (Tricine and Glicine) Tricine and Glicine
Mpn Growth curve file
Mpn Gels (Tricine and Glicine) Tricine1, Tricine2 and Glicine
Datasets ~ Methylome This data is provided based on Lluch-Senar et al., 2013
Species Description File(s)
Mge 6h and 96h file
Mpn 6h and 96h file1 and file2
Datasets ~ Genome The re-annotation of the genome of M. pneumoniae is accessible to support upcoming publications, however the gene list has not yet been updated according to this new and still not properly published data. Data of M. genitalium will be made available upon publication.
Abbreviations used in the DataBase files are defined as ID = internal identifier assigned to respective ORF; TSC = translational start codon (genome position); +/- = genome/reverse complement. If no MPN ID is given, the protein is a non-confirmed putative newly identified protein.
The Genome Re-annotation gives for each gene transcription start and termination sites (TSSs, TTSs) and the genome positions of the translational start codon (TSC) and the stop codon (Stop).
Species Description File(s)
Mpn DataBase of Putative Peptides from Genome file
Mpn DataBase of Putative Peptides from Transcriptome file
Mpn Genome Re-annotation file